RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ADGRG4Q8IZF6 3080 aa6.52□□□□□ -1.37
TDP1-214ENST00000556063 A0A1B0GTI1 187 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 TRIM64A6NGJ6 449 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 ZSCAN5BA6NJL1 495 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 PLPP2O43688 288 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 GATBO75879 557 aaKnown RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 ZFPL1O95159 310 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 CD55P08174 381 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 CSF3P09919 207 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 OCM2P0CE71 109 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 OCMP0CE72 109 aaPredicted RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 PAX1P15863 534 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 ZNF20P17024 532 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 CA6P23280 308 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 PSMA1P25786 263 aaKnown RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 CDKN1AP38936 164 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 MAP2K4P45985 399 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 GTF2A1P52655 376 aaPredicted RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 EFNA4P52798 201 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 TNFAIP6P98066 277 aaPredicted RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 EMX1Q04741 257 aaPredicted RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 SLC3A1Q07837 685 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 MLLT11Q13015 90 aaPredicted RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 TESK1Q15569 626 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 TRAM1Q15629 374 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 ALKBH6Q3KRA9 238 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 YIF1BQ5BJH7 314 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 CLVS2Q5SYC1 327 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 DMKNQ6E0U4 476 aaPredicted RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 ZDHHC23Q8IYP9 409 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 SPARTQ8N0X7 666 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 LRRC75A-AS1Q8N1F1 130 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 MS4A15Q8N5U1 240 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 CELF2-AS1Q8N7Q2 184 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 OR13C3Q8NGS6 347 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 OR14K1Q8NGZ2 314 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 RPS4Y2Q8TD47 263 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 TSEN15Q8WW01 171 aaKnown RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 IGFBPL1Q8WX77 278 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 PP6455Q8WZ26 134 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 PIGCQ92535 297 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 GHSRQ92847 366 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 LYZL4Q96KX0 146 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 OR5M11Q96RB7 305 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 MGLLQ99685 303 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 PDCD1LG2Q9BQ51 273 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 ADAT1Q9BUB4 502 aaKnown RBP6.51□□□□□ -1.37
TDP1-214ENST00000556063 GSX2Q9BZM3 304 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 CXXC4Q9H2H0 198 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 ZNF696Q9H7X3 374 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 SAP30LQ9HAJ7 183 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 ACOT13Q9NPJ3 140 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 SLC7A11Q9UPY5 501 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 DHDHQ9UQ10 334 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 PIGLQ9Y2B2 252 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 V9GYS6 101 aa6.51□□□□□ -1.37
TDP1-214ENST00000556063 CHD3Q12873 2000 aaKnown RBP6.5□□□□□ -1.37
TDP1-214ENST00000556063 PNMA8CA0A1B0GUJ8 204 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 ANKRD61A6NGH8 418 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 OR5B21A6NL26 309 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 ZNF850A8MQ14 1090 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 IFNL4K9M1U5 179 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 LALBAP00709 142 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 F12P00748 615 aaPredicted RBP6.5□□□□□ -1.37
TDP1-214ENST00000556063 NRASP01111 189 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 IGHV1-46P01743 117 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 FAHP16930 419 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 ACKR3P25106 362 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 MAPK3P27361 379 aaPredicted RBP6.5□□□□□ -1.37
TDP1-214ENST00000556063 PTH2RP49190 550 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 PRSS12P56730 875 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 DSCR9P59020 149 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 MRPS11P82912 194 aaKnown RBP6.5□□□□□ -1.37
TDP1-214ENST00000556063 PRDX4Q13162 271 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 TPBGQ13641 420 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 TSTQ16762 297 aaKnown RBP6.5□□□□□ -1.37
TDP1-214ENST00000556063 XAF1Q6GPH4 301 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 Q6ZSR3 168 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 MOB3CQ70IA8 216 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 KRT74Q7RTS7 529 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 RDH10Q8IZV5 341 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 ZFP41Q8N8Y5 198 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 OR5D14Q8NGL3 314 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 UBASH3BQ8TF42 649 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 RDH5Q92781 318 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 ERGIC1Q969X5 290 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 PERPQ96FX8 193 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 SORCS2Q96PQ0 1159 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 RTL8AQ9BWD3 113 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 TPK1Q9H3S4 243 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 DLL4Q9NR61 685 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 ZNF275Q9NSD4 429 aaPredicted RBP6.5□□□□□ -1.37
TDP1-214ENST00000556063 CKLFQ9UBR5 152 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 IL19Q9UHD0 177 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 LSM2Q9Y333 95 aaKnown RBP6.5□□□□□ -1.37
TDP1-214ENST00000556063 RHBDD3Q9Y3P4 386 aa6.5□□□□□ -1.37
TDP1-214ENST00000556063 A0A1B0GWJ7 208 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 MAGEA13PA6NCF6 341 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 TMEM210A6NLX4 147 aa6.49□□□□□ -1.37
TDP1-214ENST00000556063 LRRC30A6NM36 301 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms