RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 A0A0U1RQV5 110 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 A6NLC8 198 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 LRRC30A6NM36 301 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 ZNF850A8MQ14 1090 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 ZNF670-ZNF695F2Z2N8 137 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 DLGAP1O14490 977 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
SNX6-203ENST00000555416 ZNF254O75437 659 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 FCN3O75636 299 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 ADRA2CP18825 462 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 CFL1P23528 166 aaKnown RBP11.42□□□□□ -0.58
SNX6-203ENST00000555416 DCTDP32321 178 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 THBS2P35442 1172 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 SRP14P37108 136 aaKnown RBP11.42□□□□□ -0.58
SNX6-203ENST00000555416 PAX2Q02962 417 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 ZNF85Q03923 595 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 POU4F2Q12837 409 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 ZNF154Q13106 437 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 PRDX4Q13162 271 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 DCAF12L2Q5VW00 463 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 KLBQ86Z14 1044 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 GCSAMQ8N6F7 178 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 SPERTQ8NA61 448 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 OR1M1Q8NGA1 313 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 OR11L1Q8NGX0 322 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 OR8S1Q8NH09 359 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 HPSE2Q8WWQ2 592 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 RNF166Q96A37 237 aaPredicted RBP11.42□□□□□ -0.58
SNX6-203ENST00000555416 SEH1LQ96EE3 360 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 FAM71F1Q96KD3 344 aaPredicted RBP11.42□□□□□ -0.58
SNX6-203ENST00000555416 GPR84Q9NQS5 396 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 CTSZQ9UBR2 303 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 NUFIP1Q9UHK0 495 aaKnown RBP11.42□□□□□ -0.58
SNX6-203ENST00000555416 SLC22A13Q9Y226 551 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 NOP16Q9Y3C1 178 aaKnown RBP11.42□□□□□ -0.58
SNX6-203ENST00000555416 DNHD1Q96M86 4753 aa11.42□□□□□ -0.58
SNX6-203ENST00000555416 IGHV3OR15-7A0A075B7D8 119 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
SNX6-203ENST00000555416 A0A1B0GTI1 187 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 ACOD1A6NK06 481 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 A8MXK9 166 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.41□□□□□ -0.58
SNX6-203ENST00000555416 FSTL3O95633 263 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 BAG2O95816 211 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 CST4P01036 141 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 LHBP01229 141 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 IFNA2P01563 188 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 IRF2P14316 349 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 RPS2P15880 293 aaKnown RBP11.41□□□□□ -0.58
SNX6-203ENST00000555416 GABRB1P18505 474 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 CDC42P60953 191 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 SNRPGP62308 76 aaKnown RBP11.41□□□□□ -0.58
SNX6-203ENST00000555416 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 ZBTB49Q6ZSB9 765 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 C1orf87Q8N0U7 546 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 MUC20Q8N307 709 aaPredicted RBP11.41□□□□□ -0.58
SNX6-203ENST00000555416 PLPP7Q8NBV4 271 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 CSNK2A3Q8NEV1 391 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 OR10H4Q8NGA5 316 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 OR5P3Q8WZ94 311 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 PIGCQ92535 297 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 MNTQ99583 582 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 C9orf16Q9BUW7 83 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 C14orf119Q9NWQ9 140 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 IMPAD1Q9NX62 359 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 GTF2A1LQ9UNN4 478 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 POLR3KQ9Y2Y1 108 aaPredicted RBP11.41□□□□□ -0.58
SNX6-203ENST00000555416 ORC6Q9Y5N6 252 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 R4GMQ9 66 aa11.41□□□□□ -0.58
SNX6-203ENST00000555416 A0A0G2JMP0 313 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 A0A0X1KG70 313 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 LOC110117498-PIK3R3F6TDL0 507 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 J3QRE1 110 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 LGALS8O00214 317 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 FOXH1O75593 365 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 RPP14O95059 124 aaKnown RBP11.4□□□□□ -0.58
SNX6-203ENST00000555416 OR2T7P0C7T2 308 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 FAHP16930 419 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 PCMT1P22061 227 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 GNALP38405 381 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 EGR3Q06889 387 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 ZNF829Q3KNS6 432 aaPredicted RBP11.4□□□□□ -0.58
SNX6-203ENST00000555416 ESCO2Q56NI9 601 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 SLC25A30Q5SVS4 291 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 WDR82Q6UXN9 313 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 KRT74Q7RTS7 529 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 FAM90A1Q86YD7 464 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 C10orf67Q8IYJ2 551 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 GALNT4Q8N4A0 578 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 OR4M2Q8NGB6 313 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 OR2T27Q8NH04 317 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 LRRC29Q8WV35 223 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 TRUB1Q8WWH5 349 aaKnown RBP11.4□□□□□ -0.58
SNX6-203ENST00000555416 RPL3LQ92901 407 aaKnown RBP11.4□□□□□ -0.58
SNX6-203ENST00000555416 DACT3Q96B18 629 aaPredicted RBP11.4□□□□□ -0.58
SNX6-203ENST00000555416 NEIL1Q96FI4 390 aaPredicted RBP11.4□□□□□ -0.58
SNX6-203ENST00000555416 SSBP3Q9BWW4 388 aaPredicted RBP11.4□□□□□ -0.58
SNX6-203ENST00000555416 TLNRD1Q9H1K6 362 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 C7orf69Q9H7B7 122 aa11.4□□□□□ -0.58
SNX6-203ENST00000555416 MIOXQ9UGB7 285 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms