RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ECDO95905 644 aaPredicted RBP9.86□□□□□ -0.83
VRK1-204ENST00000555351 PLATP00750 562 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 CST4P01036 141 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 FASP25445 335 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 RBMXP38159 391 aaKnown RBP9.86□□□□□ -0.83
VRK1-204ENST00000555351 MTNR1AP48039 350 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 DAPP51397 102 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 RPS7P62081 194 aaKnown RBP9.86□□□□□ -0.83
VRK1-204ENST00000555351 APOFQ13790 326 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 FAM76BQ5HYJ3 339 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 FAM201AQ5SY85 155 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 ZDHHC13Q8IUH4 622 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 GCSAMQ8N6F7 178 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 ZDHHC22Q8N966 263 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 C12orf43Q96C57 262 aaKnown RBP9.86□□□□□ -0.83
VRK1-204ENST00000555351 ITPKCQ96DU7 683 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 MICU1Q9BPX6 476 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 NUDT16L1Q9BRJ7 211 aaKnown RBP9.86□□□□□ -0.83
VRK1-204ENST00000555351 GABARAPL1Q9H0R8 117 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 TVP23BQ9NYZ1 205 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 ZNF319Q9P2F9 582 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 AP4S1Q9Y587 144 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 N6AMT1Q9Y5N5 214 aa9.86□□□□□ -0.83
VRK1-204ENST00000555351 SLC22A31A6NKX4 558 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 A6NLC8 198 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 ZAR1LA6NP61 321 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 CLDN34H7C241 214 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 GRPP07492 148 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 ACTR3P61158 418 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 UBA52P62987 128 aaKnown RBP9.85□□□□□ -0.83
VRK1-204ENST00000555351 EFNB1P98172 346 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 MICBQ29980 383 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 ZBTB37Q5TC79 503 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 SLX4IPQ5VYV7 408 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 NXNL2Q5VZ03 156 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 TMEM236Q5W0B7 351 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 KDM4DQ6B0I6 523 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 LYPD2Q6UXB3 125 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 WDR82Q6UXN9 313 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 C12orf54Q6X4T0 127 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 KRT77Q7Z794 578 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 C11orf53Q8IXP5 236 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 ZNF679Q8IYX0 411 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 PNLDC1Q8NA58 520 aaKnown RBP9.85□□□□□ -0.83
VRK1-204ENST00000555351 BBS1Q8NFJ9 593 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 OR1M1Q8NGA1 313 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 OR10Z1Q8NGY1 313 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 RTL8AQ9BWD3 113 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 MROQ9BYG7 248 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 DNTTIP1Q9H147 329 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 PRDM13Q9H4Q3 707 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 KRT84Q9NSB2 600 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 HAO2Q9NYQ3 351 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 DNAJC27Q9NZQ0 273 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 ZNF69Q9UC07 566 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 LRP12Q9Y561 859 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 ARHGAP32A7KAX9 2087 aa9.85□□□□□ -0.83
VRK1-204ENST00000555351 hCG_1807616A0A1W2PRN6 198 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 CCDC182A6NF36 153 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 SRRM5B3KS81 715 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 P2RY10O00398 339 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 ADAM20O43506 726 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 PRTN3P24158 256 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 MAP2K3P46734 347 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 ACTG1P63261 375 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 ATPAF1Q5TC12 328 aaPredicted RBP9.84□□□□□ -0.83
VRK1-204ENST00000555351 C1orf146Q5VVC0 180 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 C12orf73Q69YU5 71 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 MEPCEQ7L2J0 689 aaKnown RBP9.84□□□□□ -0.83
VRK1-204ENST00000555351 WDR86Q86TI4 376 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 FAM90A1Q86YD7 464 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 GID4Q8IVV7 300 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 TMEM163Q8TC26 289 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 OR5P3Q8WZ94 311 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 OR8B4Q96RC9 309 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 PAPOLGQ9BWT3 736 aaKnown RBP9.84□□□□□ -0.83
VRK1-204ENST00000555351 MS4A7Q9GZW8 240 aaPredicted RBP9.84□□□□□ -0.83
VRK1-204ENST00000555351 BRD7Q9NPI1 651 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 ESM1Q9NQ30 184 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 CTSZQ9UBR2 303 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 KLHDC2Q9Y2U9 406 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 RHBDD3Q9Y3P4 386 aa9.84□□□□□ -0.83
VRK1-204ENST00000555351 DOCK11Q5JSL3 2073 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 ZNF816-ZNF321PA0A0X1KG74 233 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 TMEM269A0A1B0GVZ9 245 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 ZNF879B4DU55 563 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 C22orf46C9J442 243 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 C3orf80F5H4A9 247 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 PRKYO43930 277 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 IGLV3-1P01715 115 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 ACKR3P25106 362 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 RIDAP52758 137 aaKnown RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 PRDX4Q13162 271 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 GFOD2Q3B7J2 385 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 ZNF829Q3KNS6 432 aaPredicted RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 AADACL4Q5VUY2 407 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 SFRP4Q6FHJ7 346 aaPredicted RBP9.83□□□□□ -0.84
VRK1-204ENST00000555351 ZNF826PQ6ZT77 177 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 SLC36A1Q7Z2H8 476 aa9.83□□□□□ -0.84
VRK1-204ENST00000555351 SIGLECL1Q8N7X8 197 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms