RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 KCTD8Q6ZWB6 473 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 BOLLQ8N9W6 283 aaKnown RBP10.19□□□□□ -0.78
SRP54-206ENST00000555317 Q8TCH9 128 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 ITFG2Q969R8 447 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 FAM71F1Q96KD3 344 aaPredicted RBP10.19□□□□□ -0.78
SRP54-206ENST00000555317 SIGLEC11Q96RL6 698 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 RTL8AQ9BWD3 113 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 VCXQ9H320 206 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 GPR84Q9NQS5 396 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 C1orf123Q9NWV4 160 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 ZNF319Q9P2F9 582 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 RNF7Q9UBF6 113 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 NUFIP1Q9UHK0 495 aaKnown RBP10.19□□□□□ -0.78
SRP54-206ENST00000555317 GNG8Q9UK08 70 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 RHBDD3Q9Y3P4 386 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 PCDHGB1Q9Y5G3 927 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 MPC1Q9Y5U8 109 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 SNX5Q9Y5X3 404 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 R4GMQ9 66 aa10.19□□□□□ -0.78
SRP54-206ENST00000555317 PPIAL4EA0A075B759 164 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 A0A0G2JMP0 313 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 A0A0X1KG70 313 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 ZNF816-ZNF321PA0A0X1KG74 233 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 DAPL1A0PJW8 107 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 ERICH4A6NGS2 130 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 METTL15A6NJ78 407 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 PRR32B1ATL7 298 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 ANKRD65E5RJM6 399 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 PPIAL4DF5H284 164 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 SULT1C4O75897 302 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 ZNF205O95201 554 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 PPIAL4FP0DN26 164 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 ATP6V1B1P15313 513 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 RPS2P15880 293 aaKnown RBP10.18□□□□□ -0.78
SRP54-206ENST00000555317 MFGE8Q08431 387 aaPredicted RBP10.18□□□□□ -0.78
SRP54-206ENST00000555317 RIPPLY1Q0D2K3 151 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 HNRNPA0Q13151 305 aaKnown RBP10.18□□□□□ -0.78
SRP54-206ENST00000555317 PRDX4Q13162 271 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 MPPED2Q15777 294 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 ESCO2Q56NI9 601 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 NLRC3Q7RTR2 1065 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 LRRC28Q86X40 367 aaPredicted RBP10.18□□□□□ -0.78
SRP54-206ENST00000555317 ZDHHC23Q8IYP9 409 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 PACRGLQ8N7B6 248 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 SEMA6DQ8NFY4 1073 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 OR4M2Q8NGB6 313 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 OR51E1Q8TCB6 317 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 CYGBQ8WWM9 190 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 PIGCQ92535 297 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 UBE2FQ969M7 185 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 TRIM36Q9NQ86 728 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 FAM118AQ9NWS6 357 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 MRM2Q9UI43 246 aaKnown RBP10.18□□□□□ -0.78
SRP54-206ENST00000555317 OR52A1Q9UKL2 312 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 PPIAL4AQ9Y536 164 aa10.18□□□□□ -0.78
SRP54-206ENST00000555317 ZNF850A8MQ14 1090 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 MAGEB4O15481 346 aaPredicted RBP10.17□□□□□ -0.78
SRP54-206ENST00000555317 PLPP2O43688 288 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 FOXH1O75593 365 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 PNPP00491 289 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 CST4P01036 141 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 FAM157CP0CG43 387 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 PEX2P28328 305 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 LCN2P80188 198 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 DCAF12L2Q5VW00 463 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 FAHD2BQ6P2I3 314 aaPredicted RBP10.17□□□□□ -0.78
SRP54-206ENST00000555317 IL17RELQ6ZVW7 336 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 SSX6Q7RTT6 188 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 ENTHD1Q8IYW4 607 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 TEX29Q8N6K0 151 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 FAHD2AQ96GK7 314 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 LYZL4Q96KX0 146 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 ADI1Q9BV57 179 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 PLEKHA1Q9HB21 404 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 PATZ1Q9HBE1 687 aaKnown RBP10.17□□□□□ -0.78
SRP54-206ENST00000555317 MIOXQ9UGB7 285 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 OR5V1Q9UGF6 321 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 ENPP5Q9UJA9 477 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 PIGLQ9Y2B2 252 aa10.17□□□□□ -0.78
SRP54-206ENST00000555317 A0A1B0GVI7 797 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 TMEM210A6NLX4 147 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 CEACAM18A8MTB9 384 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 SLC16A6O15403 523 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 DHRS3O75911 302 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 PTBP3O95758 552 aaKnown RBP10.16□□□□□ -0.78
SRP54-206ENST00000555317 FADS2O95864 444 aaKnown RBP10.16□□□□□ -0.78
SRP54-206ENST00000555317 GATA3P23771 443 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 CPT2P23786 658 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ACKR3P25106 362 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 RBMXP38159 391 aaKnown RBP10.16□□□□□ -0.78
SRP54-206ENST00000555317 PMELP40967 661 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ACTA2P62736 377 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ACTG2P63267 376 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ZNF91Q05481 1191 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 SCGB2A2Q13296 93 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ODF4Q2M2E3 257 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 ZBTB37Q5TC79 503 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 TTC23Q5W5X9 447 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 PLCXD3Q63HM9 321 aa10.16□□□□□ -0.78
SRP54-206ENST00000555317 LPCAT4Q643R3 524 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms