RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CEBPDP49716 269 aaPredicted RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KLK7P49862 253 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 HLCSP50747 726 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF136P52737 540 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 EMP2P54851 167 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 RAP1BP61224 184 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 YWHAEP62258 255 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SELENOTP62341 195 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TGFBR3Q03167 851 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PNOCQ13519 176 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 IHHQ14623 411 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 OXA1LQ15070 435 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TSC22D1Q15714 1073 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 NSDHLQ15738 373 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KCTD19Q17RG1 926 aaPredicted RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 MICBQ29980 383 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KLHL38Q2WGJ6 581 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM249Q2WGJ8 235 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PARP15Q460N3 678 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 DMRTC1Q5HYR2 192 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SAMD4BQ5PRF9 694 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 BRMS1LQ5PSV4 323 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PDZK1Q5T2W1 519 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 HENMT1Q5T8I9 393 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 OR2G6Q5TZ20 316 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TIGD3Q6B0B8 471 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SPESP1Q6UW49 350 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TMIGD1Q6UXZ0 262 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 IL34Q6ZMJ4 242 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PGAP1Q75T13 922 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF571Q7Z3V5 609 aaPredicted RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 CYP4Z2PQ8N1L4 340 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 C6orf223Q8N319 242 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ATPAF2Q8N5M1 289 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM156Q8N614 296 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 Q8N7P7 452 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 CNEP1R1Q8N9A8 125 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 EIF1ADQ8N9N8 165 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 BHLHE23Q8NDY6 225 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 OR10G3Q8NGC4 313 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 OR51S1Q8NGJ8 323 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 OR5D13Q8NGL4 314 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 NEIL3Q8TAT5 605 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 BLOC1S5Q8TDH9 187 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 DOK4Q8TEW6 326 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PIH1D2Q8WWB5 315 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TSLPQ969D9 159 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ECHDC3Q96DC8 303 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 COX14Q96I36 57 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TMEM101Q96IK0 257 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 IP6K3Q96PC2 410 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SECISBP2Q96T21 854 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 RNF2Q99496 336 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TSG101Q99816 390 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SLC39A3Q9BRY0 314 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TRIM62Q9BVG3 475 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TTTY12Q9BZ98 90 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 FAM96AQ9H5X1 160 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ASB8Q9H765 288 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 METTL17Q9H7H0 456 aaPredicted RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 KIR3DX1Q9H7L2 352 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 YY1AP1Q9H869 796 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 SLC25A22Q9H936 323 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 NANOGQ9H9S0 305 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 PLGRKTQ9HBL7 147 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 MRM3Q9HC36 420 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ETNK2Q9NVF9 386 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 DMAC2Q9NW81 257 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 THUMPD1Q9NXG2 353 aaKnown RBP1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ANAPC11Q9NYG5 84 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 BFARQ9NZS9 450 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 TMCO1Q9UM00 188 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF835Q9Y2P0 537 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 UBR4Q5T4S7 5183 aa1.03□□□□□ -2.24
PRPF39-208ENST00000554785 ARFGEF3Q5TH69 2177 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 A0A0G2JN53 185 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 CXorf51AA0A1B0GTR3 108 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 TSPAN11A1L157 253 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 PSMB11A5LHX3 300 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 LOC110117498-PIK3R3F6TDL0 507 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 GFYI3L273 518 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 CETN3O15182 167 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 PLXNB1O43157 2135 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 CD5LO43866 347 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 MFSD11O43934 449 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 RDH16O75452 317 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 TRAPPC6AO75865 159 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 OXSR1O95747 527 aaPredicted RBP1.03□□□□□ -2.25
PRPF39-208ENST00000554785 OPN1MWP04001 364 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 P04436 131 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 HLA-DQB2P05538 268 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SERPINA7P05543 415 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SERPIND1P05546 499 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 SOD3P08294 240 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 OPN1MW2P0DN77 364 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 OPN1MW3P0DN78 364 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 GLP1RP43220 463 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 GPM6AP51674 278 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 STC1P52823 247 aa1.03□□□□□ -2.25
PRPF39-208ENST00000554785 ATP1B3P54709 279 aa1.03□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms