RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 OR6C6A6NF89 314 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 TRPC5OSA6NMA1 111 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 LINC00473A8K010 186 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 M0QX08 132 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 POLR3GO15318 223 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 NDUFB3O43676 98 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 ANGPTL7O43827 346 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 AHCYL1O43865 530 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 TYROBPO43914 113 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 FCN3O75636 299 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 LHBP01229 141 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 CHRM2P08172 466 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 PAICSP22234 425 aaKnown RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 AQP1P29972 269 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 RPL4P36578 427 aaKnown RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 RBM34P42696 430 aaKnown RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 SLC18A1P54219 525 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 LSM6P62312 80 aaKnown RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 VSNL1P62760 191 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 MZT1Q08AG7 82 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 STX3Q13277 289 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 BLMHQ13867 455 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 MICBQ29980 383 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 LRRC75BQ2VPJ9 315 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 CCDC92Q53HC0 331 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 BEND6Q5SZJ8 279 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 PRAMEF6Q5VXH4 476 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 TEX36Q5VZQ5 186 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 SLC36A1Q7Z2H8 476 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 RBM45Q8IUH3 476 aaKnown RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 PNKDQ8N490 385 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 BHLHE23Q8NDY6 225 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 SDR9C7Q8NEX9 313 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 OR51G2Q8NGK0 314 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 C8orf46Q8TAG6 207 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 MUC7Q8TAX7 377 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 LRRC8CQ8TDW0 803 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 SPRYD4Q8WW59 207 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 SLC7A6Q92536 515 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 RORBQ92753 470 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 NKX3-1Q99801 234 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 PRSS27Q9BQR3 290 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 CHID1Q9BWS9 393 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 METTL8Q9H825 291 aaKnown RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 ZNF702PQ9H963 129 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 SDR39U1Q9NRG7 319 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-229ENST00000554672 INPP5EQ9NRR6 644 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 DNAJB11Q9UBS4 358 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 ATPIF1Q9UII2 106 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 PLXNB1O43157 2135 aa3.89□□□□□ -1.79
ATXN3-229ENST00000554672 RYR2Q92736 4967 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 TCRBV4S1A1TA0A5B7 111 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 EVPLLA8MZ36 301 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 M0R1W7 72 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 F2RL2O00254 374 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 UBDO15205 165 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 HDAC3O15379 428 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 CHST1O43916 411 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 GMDSO60547 372 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 CLIC3O95833 236 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 ALDOBP05062 364 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 MUC1P15941 1255 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 HOXB9P17482 250 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 GPX2P18283 190 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 CA6P23280 308 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 HOXD3P31249 432 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 GRK5P34947 590 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 TGM4P49221 684 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 HOXA4Q00056 320 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 PRB3Q04118 309 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 ECH1Q13011 328 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 KLRD1Q13241 179 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 AQP6Q13520 282 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 GK2Q14410 553 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 CNN3Q15417 329 aaKnown RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 OR8G1Q15617 311 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 ANKDD1AQ495B1 522 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 LRRC10Q5BKY1 277 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 DMRTC1Q5HYR2 192 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 LRIF1Q5T3J3 769 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 ATPAF1Q5TC12 328 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-229ENST00000554672 SLC2A7Q6PXP3 512 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 UNQ9370/PRO34162Q6UXP9 181 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 COLCA1Q6ZS62 124 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 PGAP1Q75T13 922 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 AMIGO2Q86SJ2 522 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 FAM90A1Q86YD7 464 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 NKAIN4Q8IVV8 208 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 MSRB3Q8IXL7 192 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 GCSAMQ8N6F7 178 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 GJC3Q8NFK1 279 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 GPR32P1Q8NGA4 272 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 OR5AU1Q8NGC0 362 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 OR4D11Q8NGI4 311 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 OR5D13Q8NGL4 314 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 PFN4Q8NHR9 129 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 PIFOQ8TCI5 191 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 TMEM239Q8WW34 195 aa3.88□□□□□ -1.79
ATXN3-229ENST00000554672 ACOT11Q8WXI4 607 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms