RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PUDPQ08623 228 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 HERPUD1Q15011 391 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 MAPK11Q15759 364 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 SMU1Q2TAY7 513 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 SPATA46Q5T0L3 261 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF774Q6NX45 483 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 C9orf47Q6ZRZ4 202 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF621Q6ZSS3 439 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 CCDC121Q6ZUS5 278 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 LRRC34Q8IZ02 419 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 RBM15BQ8NDT2 890 aaKnown RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 OR4K5Q8NGD3 323 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 OR6X1Q8NH79 312 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 VANGL1Q8TAA9 524 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 SLC25A40Q8TBP6 338 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 DNAJA4Q8WW22 397 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 CCDC115Q96NT0 180 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 ABHD1Q96SE0 405 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 EPYCQ99645 322 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 ARHGDIGQ99819 225 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 SLC25A33Q9BSK2 321 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 TXLNGYQ9BZA5 131 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 TRIM15Q9C019 465 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 OR2J1Q9GZK6 312 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 DPAGT1Q9H3H5 408 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 CENPHQ9H3R5 247 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 CACYBPQ9HB71 228 aaKnown RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 MAN2C1Q9NTJ4 1040 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 ACOXLQ9NUZ1 547 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 MRPL39Q9NYK5 338 aaKnown RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 PSMC3IPQ9P2W1 217 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 IL19Q9UHD0 177 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 BTNL2Q9UIR0 455 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 PPP1R3CQ9UQK1 317 aa3.99□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF443Q9Y2A4 671 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-228ENST00000554592 IGKV1D-42A0A075B6H8 117 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 A0A0G2JPF8 293 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 CENPVL3A0A0U1RRI6 287 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 hDV102S1A0JD36 115 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 C5orf49A4QMS7 147 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 HNRNPCL2B2RXH8 293 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF879B4DU55 563 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 HNRNPCL3B7ZW38 293 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 H0YHG0 523 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 COPEO14579 308 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 RGS16O15492 202 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TIMM8AO60220 97 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SERPINI2O75830 405 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 OR6A2O95222 327 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 FSTL3O95633 263 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 IGHV4-59P01825 116 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 C1QCP02747 245 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 BGLAPP02818 100 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SFTPBP07988 381 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 MMP7P09237 267 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 QDPRP09417 244 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 HNRNPCL4P0DMR1 293 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 MMP9P14780 707 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TUBG1P23258 451 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 C21orf33P30042 268 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 S100A3P33764 101 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SERPINB5P36952 375 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TGFBR2P37173 567 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 WNT5AP41221 380 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 ARHGDIAP52565 204 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 CRISP3P54108 245 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 PPP1CBP62140 327 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 HOXC5Q00444 222 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 EMX1Q04741 257 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 LRRC74AQ0VAA2 488 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 PSG7Q13046 419 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 DEFB121Q5J5C9 76 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 PABPC1L2AQ5JQF8 200 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM255AQ5JRV8 349 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 FAM91A1Q658Y4 838 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 GPR139Q6DWJ6 353 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 DHRS7BQ6IAN0 325 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SLC35E4Q6ICL7 350 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 ULK3Q6PHR2 472 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 C11orf88Q6PI97 169 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 ARL9Q6T311 187 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SLC35D2Q76EJ3 337 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 KRT74Q7RTS7 529 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 ZNF101Q8IZC7 436 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 C10orf53Q8N6V4 93 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 CSNK2A3Q8NEV1 391 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 OR2AK2Q8NG84 335 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 OR2Z1Q8NG97 314 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 OR8B3Q8NGG8 313 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SLC38A5Q8WUX1 472 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 C10orf82Q8WW14 230 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TESCQ96BS2 214 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TLCD1Q96CP7 247 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 ORAI1Q96D31 301 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 SLC25A44Q96H78 314 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-228ENST00000554592 POM121L2Q96KW2 1035 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 OR8B2Q96RD0 313 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 PANX1Q96RD7 426 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 TMEM246Q9BRR3 403 aa3.98□□□□□ -1.77
ATXN3-228ENST00000554592 NSRP1Q9H0G5 558 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms