RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 ZNF432O94892 652 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 TTRP02766 147 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 CSN2P05814 226 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 CD63P08962 238 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-212ENST00000554467 BTF3P20290 206 aaKnown RBP10.3□□□□□ -0.76
SHMT2-212ENST00000554467 SRD5A2P31213 254 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 POU3F4P49335 361 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 GABREP78334 506 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 C11orf88Q6PI97 169 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 ARMC10Q8N2F6 343 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 SPICQ8N5J4 248 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 PXT1Q8NFP0 134 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 ALKBH3Q96Q83 286 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-212ENST00000554467 ZMAT3Q9HA38 289 aaKnown RBP10.3□□□□□ -0.76
SHMT2-212ENST00000554467 HHLA2Q9UM44 414 aa10.3□□□□□ -0.76
SHMT2-212ENST00000554467 E9PLN8 166 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 PATE4P0C8F1 98 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 PPP3CBP16298 524 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 ART1P52961 327 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 FOXO1Q12778 655 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 OR1C1Q15619 314 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 SWI5Q1ZZU3 235 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 HACD4Q5VWC8 232 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 OR10D3Q8NH80 312 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 ABHD3Q8WU67 409 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 SMIM4Q8WVI0 70 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 DVL3Q92997 716 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 FAM71F1Q96KD3 344 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 NOX3Q9HBY0 568 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 FOXJ3Q9UPW0 622 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 KMT2EQ8IZD2 1858 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 LOC100509620A0A075B734 347 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 F5H5K5 113 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 ITGB2P05107 769 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 CD2P06729 351 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 PSMB1P20618 241 aaKnown RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 PSMA6P60900 246 aaKnown RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 CSNK2A1P68400 391 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 C3AR1Q16581 482 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 PAN3Q58A45 887 aaKnown RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 GLDNQ6ZMI3 551 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 FAM57BQ71RH2 274 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 OR10K1Q8NGX5 313 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 NKD1Q969G9 470 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 NTNG2Q96CW9 530 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 ADAT3Q96EY9 351 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 ACTR6Q9GZN1 396 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 STEAP1Q9UHE8 339 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 PIEZO2Q9H5I5 2752 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 MEX3AA1L020 520 aaKnown RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 ARGFXA6NJG6 315 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 F12P00748 615 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 CRYBA1P05813 215 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 DBHP09172 617 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 MAGEA5P43359 124 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 PTH2RP49190 550 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 ZNF121P58317 390 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 GUCA2AQ02747 115 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 RIPPLY1Q0D2K3 151 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 HIST3H3Q16695 136 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 C2orf76Q3KRA6 126 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 LINC00303Q3SY05 128 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 OR1M1Q8NGA1 313 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 UTP23Q9BRU9 249 aaKnown RBP10.29□□□□□ -0.76
SHMT2-212ENST00000554467 GPR87Q9BY21 358 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 CKLFQ9UBR5 152 aa10.29□□□□□ -0.76
SHMT2-212ENST00000554467 KIAA1549Q9HCM3 1950 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 A0A1B0GUH1 482 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 RAB19A4D1S5 217 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 SYT7O43581 403 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 TLX3O43711 291 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-212ENST00000554467 FTH1P19P0C7X4 201 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ABOP16442 354 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 MPGP29372 298 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 AKR1C2P52895 323 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 AKR1C1Q04828 323 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 RAB11BQ15907 218 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 PCGF3Q3KNV8 242 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ELP2Q6IA86 826 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ABHD12BQ7Z5M8 362 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-212ENST00000554467 SULF2Q8IWU5 870 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 OR13C9Q8NGT0 318 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ADAMTS17Q8TE56 1095 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 FAM3DQ96BQ1 224 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ULBP2Q9BZM5 246 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 C21orf140B9A014 251 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 SULT1B1O43704 296 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ECDO95905 644 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-212ENST00000554467 C4BPBP20851 252 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ACHEP22303 614 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 SLC6A9P48067 706 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 DCAF12L2Q5VW00 463 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 TMPRSS7Q7RTY8 843 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 GALNTL5Q7Z4T8 443 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 ZNF283Q8N7M2 679 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 OR2M7Q8NG81 312 aa10.28□□□□□ -0.76
SHMT2-212ENST00000554467 FAM46BQ96A09 425 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms