RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 LGALS13Q9UHV8 139 aa3.14□□□□□ -1.91
CHD8-207ENST00000554384 PRO0461Q9UI25 63 aa3.14□□□□□ -1.91
CHD8-207ENST00000554384 ZNF222Q9UK12 451 aa3.14□□□□□ -1.91
CHD8-207ENST00000554384 ZFHX3Q15911 3703 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 PCNX1Q96RV3 2341 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 IGHV5-51A0A0C4DH38 117 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 M0QZ92 97 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 CCL16O15467 120 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 PRB2P02812 416 aaPredicted RBP3.13□□□□□ -1.91
CHD8-207ENST00000554384 EIF4EP06730 217 aaKnown RBP3.13□□□□□ -1.91
CHD8-207ENST00000554384 HLA-EP13747 358 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 HOXA6P31267 233 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 FOXN2P32314 431 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 LONP1P36776 959 aaKnown RBP3.13□□□□□ -1.91
CHD8-207ENST00000554384 CEACAM3P40198 252 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 CSNK1A1P48729 337 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 GINS1Q14691 196 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 IGFBP7Q16270 282 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 SNRNP35Q16560 246 aaKnown RBP3.13□□□□□ -1.91
CHD8-207ENST00000554384 FAM83EQ2M2I3 478 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 ARL9Q6T311 187 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 C12orf54Q6X4T0 127 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 FBXW12Q6X9E4 464 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 LUZP2Q86TE4 346 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 OR10G4Q8NGN3 311 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 OR5W2Q8NH69 310 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 LYPD6BQ8NI32 183 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 LKAAEAR1Q8TD35 194 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 CREB3L1Q96BA8 519 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 OR2A5Q96R48 311 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 C12orf10Q9HB07 376 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 ZDHHC4Q9NPG8 344 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 AGPAT4Q9NRZ5 378 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 UVRAGQ9P2Y5 699 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 SLC17A4Q9Y2C5 497 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 USP9YO00507 2555 aaPredicted RBP3.13□□□□□ -1.91
CHD8-207ENST00000554384 CCDC171Q6TFL3 1326 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 PHLPP2Q6ZVD8 1323 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 IGSF9BQ9UPX0 1349 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 COL6A6A6NMZ7 2263 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 GREB1Q4ZG55 1949 aa3.13□□□□□ -1.91
CHD8-207ENST00000554384 TLN1Q9Y490 2541 aaKnown RBP3.13□□□□□ -1.91
CHD8-207ENST00000554384 NID2Q14112 1375 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 FLNCQ14315 2725 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 IGHV3-66A0A0C4DH42 116 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 L7N2F9 121 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 FKBP6O75344 327 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 CLDN11O75508 207 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 KRT14P02533 472 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 IGKV3-11P04433 115 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 BCHEP06276 602 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 SERPINE2P07093 398 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 MYL2P10916 166 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 PGAM1P18669 254 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 GGT1P19440 569 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 NAMPTP43490 491 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 UQCRFS1P47985 274 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 ATP5OP48047 213 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 CX3CR1P49238 355 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 SLC11A1P49279 550 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 MNAT1P51948 309 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 STXBP1P61764 594 aaKnown RBP3.12□□□□□ -1.91
CHD8-207ENST00000554384 MERTKQ12866 999 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 PON2Q15165 354 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 OR7A5Q15622 319 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 STK11Q15831 433 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 EIF3MQ7L2H7 374 aaKnown RBP3.12□□□□□ -1.91
CHD8-207ENST00000554384 ZNF695Q8IW36 515 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 PGAM4Q8N0Y7 254 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 DEFB119Q8N690 84 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 OR10AD1Q8NGE0 317 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 MCUR1Q96AQ8 359 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 STARD4Q96DR4 205 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 NEURL3Q96EH8 262 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 C11orf70Q9BRQ4 267 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 ZNF532Q9HCE3 1301 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 LRBAP50851 2863 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 LAMA4Q16363 1823 aa3.12□□□□□ -1.91
CHD8-207ENST00000554384 F8P00451 2351 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 ABCA2Q9BZC7 2435 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 ASCC3Q8N3C0 2202 aaKnown RBP3.11□□□□□ -1.91
CHD8-207ENST00000554384 AHCTF1Q8WYP5 2266 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 NBPF19A0A087WUL8 3843 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 TRBV9A0A0B4J1U6 114 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 IGHV3-74A0A0B4J1X5 117 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 SMKR1H3BMG3 65 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 RDH16O75452 317 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 ERCC1P07992 297 aaPredicted RBP3.11□□□□□ -1.91
CHD8-207ENST00000554384 UBTFL6P0CB48 400 aaPredicted RBP3.11□□□□□ -1.91
CHD8-207ENST00000554384 GALP22466 123 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 OR1E1P30953 314 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 OTX1P32242 354 aaPredicted RBP3.11□□□□□ -1.91
CHD8-207ENST00000554384 RAP1AP62834 184 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 ERCC8Q13216 396 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 EIF4EBP2Q13542 120 aaPredicted RBP3.11□□□□□ -1.91
CHD8-207ENST00000554384 LINC00483Q53H64 154 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 FAM78AQ5JUQ0 283 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 C1orf185Q5T7R7 199 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 METTL21CQ5VZV1 264 aa3.11□□□□□ -1.91
CHD8-207ENST00000554384 TMEM53Q6P2H8 277 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms