RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ACTG2P63267 376 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF85Q03923 595 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MALLQ13021 153 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MRPL28Q13084 256 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 GALEQ14376 348 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SMN1Q16637 294 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF718Q3SXZ3 478 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 CDONQ4KMG0 1287 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MBNL2Q5VZF2 373 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 LAIR2Q6ISS4 152 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 LRRN1Q6UXK5 716 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 FBXW12Q6X9E4 464 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 PLEKHG7Q6ZR37 379 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 C9orf139Q6ZV77 190 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 RFPL4BQ6ZWI9 263 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SPATC1Q76KD6 591 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 FAM220AQ7Z4H9 259 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SYS1Q8N2H4 156 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 DEFB108BQ8NET1 73 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 BPIFB6Q8NFQ5 453 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 OR52H1Q8NGJ2 320 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 OR52I1Q8NGK6 324 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 OR1J1Q8NGS3 322 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 KLF14Q8TD94 323 aaPredicted RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SNX33Q8WV41 574 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 C22orf15Q8WYQ4 148 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SLC7A6Q92536 515 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SLC25A28Q96A46 364 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MARS2Q96GW9 593 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF48Q96MX3 618 aaPredicted RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SYT3Q9BQG1 590 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 RGCCQ9H4X1 137 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 OPA3Q9H6K4 179 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MOB1AQ9H8S9 216 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SCN3BQ9NY72 215 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 SLCO1C1Q9NYB5 712 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF69Q9UC07 566 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 CGGBP1Q9UFW8 167 aaPredicted RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 MRM2Q9UI43 246 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 PSORS1C1Q9UIG5 152 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 GPR160Q9UJ42 338 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF391Q9UJN7 358 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 IKZF2Q9UKS7 526 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 NUP50Q9UKX7 468 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 DIMT1Q9UNQ2 313 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 STARD10Q9Y365 291 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 EXOSC1Q9Y3B2 195 aaKnown RBP6.51□□□□□ -1.37
ABCD4-220ENST00000553998 TPRKBQ9Y3C4 175 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 WIPI2Q9Y4P8 454 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 LRP12Q9Y561 859 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 TANC2Q9HCD6 1990 aa6.51□□□□□ -1.37
ABCD4-220ENST00000553998 IGHV1-69-2A0A0G2JMI3 117 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 TMEM269A0A1B0GVZ9 245 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 PRR32B1ATL7 298 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 SLC1A7O00341 560 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 XRCC2O43543 280 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 XPNPEP2O43895 674 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 FAM20BO75063 409 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 IGHV3-13P01766 116 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 ANXA2P07355 339 aaKnown RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 RAC2P15153 192 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 SELEP16581 610 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 MYL12AP19105 171 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 MDKP21741 143 aaPredicted RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 LIPAP38571 399 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 KLF3P57682 345 aaPredicted RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF121P58317 390 aaPredicted RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 MVKQ03426 396 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 ST3GAL4Q11206 333 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 BAMBIQ13145 260 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 SLC9A3R2Q15599 337 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 KLF17Q5JT82 389 aaPredicted RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 AVPI1Q5T686 147 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 RNLSQ5VYX0 342 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 SSX6Q7RTT6 188 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 PRSS45Q7RTY3 260 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 SYNPRQ8TBG9 265 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 SLC25A40Q8TBP6 338 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 GGHQ92820 318 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 RAB1CQ92928 201 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 MYDGFQ969H8 173 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 SPSB4Q96A44 273 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 HAVCR1Q96D42 359 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 TMEM80Q96HE8 168 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 CNBD2Q96M20 576 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 TBX5Q99593 518 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 CITED1Q99966 193 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 ZNF649Q9BS31 505 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 YTHDF1Q9BYJ9 559 aaKnown RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 OR2J1Q9GZK6 312 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 OR10A2Q9H208 303 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 MMP27Q9H306 513 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 PRDM13Q9H4Q3 707 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 CYSLTR2Q9NS75 346 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 FKBP14Q9NWM8 211 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 FAM206AQ9NX38 181 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 CHCHD3Q9NX63 227 aaKnown RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 ERVK13-1Q9NX77 482 aa6.5□□□□□ -1.37
ABCD4-220ENST00000553998 NUFIP1Q9UHK0 495 aaKnown RBP6.5□□□□□ -1.37
ABCD4-220ENST00000553998 DUSP13Q9UII6 198 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms