RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 C12orf57Q99622 126 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 SDHCQ99643 169 aaPredicted RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 KIFC1Q9BW19 673 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 YTHDF1Q9BYJ9 559 aaKnown RBP2.94□□□□□ -1.94
TDP1-207ENST00000553617 ARL6Q9H0F7 186 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ARMC7Q9H6L4 198 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 UGT1A7Q9HAW7 530 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 UGT1A8Q9HAW9 530 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 RETNQ9HD89 108 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 TREM2Q9NZC2 230 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 VAPAQ9P0L0 249 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 RWDD2AQ9UIY3 292 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ZNF391Q9UJN7 358 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 COPS3Q9UNS2 423 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ARHGEF10O15013 1369 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 FLT4P35916 1363 aa2.94□□□□□ -1.94
TDP1-207ENST00000553617 ABCC11Q96J66 1382 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 IGHV1OR15-1A0A075B7D0 117 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 KIR2DS1A0A191URI9 304 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 A0A1B0GV90 55 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 METTL15A6NJ78 407 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 GJE1A6NN92 205 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 EFCAB9A8MZ26 197 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SEC14L6B5MCN3 397 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TSTD3H0UI37 97 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 J3QLI3 93 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 CXCR6O00574 342 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 PFDN6O15212 129 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 CHP2O43745 196 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SSNA1O43805 119 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 MPZL2O60487 215 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 EIF1BO60739 113 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 MPDU1O75352 247 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 C1orf105O95561 183 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 CYB5R3P00387 301 aaPredicted RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 HLA-AP01891 365 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 MT-ND4P03905 459 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 BCHEP06276 602 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 OR8U9P0C7N5 309 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 FAM228BP0C875 321 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 C8orf88P0DMB2 117 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 COX4I1P13073 169 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 GATA1P15976 413 aaPredicted RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 TCP1P17987 556 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 CELP19835 753 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 PSMA1P25786 263 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 GDF1P27539 372 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SERPINB5P36952 375 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 VHLP40337 213 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 EIF1P41567 113 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 BTDP43251 543 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 UGT2B15P54855 530 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 CLDN6P56747 220 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TAS2R39P59534 338 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SLC35B1P78383 322 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 PRKCDQ05655 676 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 KIR2DS1Q14954 304 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 OXA1LQ15070 435 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SF3A2Q15428 464 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 TAL2Q16559 108 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 DEFB115Q30KQ5 88 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TRMT5Q32P41 509 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 KLF17Q5JT82 389 aaPredicted RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 OR52E8Q6IFG1 317 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 CGB2Q6NT52 195 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 CD200R1LQ6Q8B3 271 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 GDPD3Q7L5L3 318 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 OR6V1Q8N148 313 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TPRX1Q8N7U7 411 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TMEM161BQ8NDZ6 487 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 COQ8AQ8NI60 647 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 FAM45AQ8TCE6 357 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SFXN5Q8TD22 340 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 GTSF1Q8WW33 167 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 YIPF5Q969M3 257 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TMBIM1Q969X1 311 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 MARC2Q969Z3 335 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TESCQ96BS2 214 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SFRP2Q96HF1 295 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 PPP1R2P1Q96PQ5 205 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 OR5M11Q96RB7 305 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 C19orf24Q9BVV8 132 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 CDCA4Q9BXL8 241 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TLNRD1Q9H1K6 362 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SPNS1Q9H2V7 528 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 BOLA2Q9H3K6 86 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 RBKSQ9H477 322 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TMEM38AQ9H6F2 299 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 RDH14Q9HBH5 336 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 C6orf50Q9HD87 102 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 TMEM138Q9NPI0 162 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 BTNL2Q9UIR0 455 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 OR52A1Q9UKL2 312 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 SNX24Q9Y343 169 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 RPL36Q9Y3U8 105 aaKnown RBP2.93□□□□□ -1.94
TDP1-207ENST00000553617 ASB4Q9Y574 426 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 OR51B4Q9Y5P0 310 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 C9orf84Q5VXU9 1444 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 PPIP5K1Q6PFW1 1433 aa2.93□□□□□ -1.94
TDP1-207ENST00000553617 POGZQ7Z3K3 1410 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms