RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 IL13RA1P78552 427 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 SORDQ00796 357 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 OC90Q02509 493 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-205ENST00000553474 SMUG1Q53HV7 270 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 PRAMEF20Q5VT98 475 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 CARD17Q5XLA6 110 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 RGS7BPQ6MZT1 257 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-205ENST00000553474 CD163Q86VB7 1156 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 FAM89BQ8N5H3 189 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 EIF4E3Q8N5X7 224 aaKnown RBP11.38□□□□□ -0.59
SHMT2-205ENST00000553474 OR5M9Q8NGP3 310 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 PHYHIPLQ96FC7 376 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF416Q9BWM5 594 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 SLC25A32Q9H2D1 315 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 MYEF2Q9P2K5 600 aaKnown RBP11.38□□□□□ -0.59
SHMT2-205ENST00000553474 PFDN2Q9UHV9 154 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 VSIG4Q9Y279 399 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 HS3ST3B1Q9Y662 390 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 V9GYS6 101 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 DMXL1Q9Y485 3027 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 C9orf170A2RU37 121 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 DHRS3O75911 302 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 NMBP08949 121 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 ABOP16442 354 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 GNB3P16520 340 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 CD96P40200 585 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF84P51523 738 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 MLF1P58340 268 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 CYCSP99999 105 aaKnown RBP11.37□□□□□ -0.59
SHMT2-205ENST00000553474 NSUN5P2Q63ZY6 315 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 C11orf87Q6NUJ2 197 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 FAM57BQ71RH2 274 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 RPS19BP1Q86WX3 136 aaKnown RBP11.37□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM17Q86X19 198 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 HOGA1Q86XE5 327 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM123Q8N131 208 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 OR4K15Q8NH41 348 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 TERB2Q8NHR7 220 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 NUDCD2Q8WVJ2 157 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 KCNE4Q8WWG9 221 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 CPNE2Q96FN4 548 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-205ENST00000553474 PGAM5Q96HS1 289 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 CDC6Q99741 560 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF160Q9HCG1 818 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 HPF1Q9NWY4 346 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 DKKL1Q9UK85 242 aa11.37□□□□□ -0.59
SHMT2-205ENST00000553474 TRAV14DV4A0A0A6YYC5 116 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 NSG1A0A0A6YYJ2 146 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 A0A0B4J2A0 478 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 KRBOX1C9JBD0 128 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 DHHO43323 396 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 SSX5O60225 188 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 ZIC3O60481 467 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 RAMP1O60894 148 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 GP1BAP07359 652 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 ZP3P21754 424 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 FOLR3P41439 243 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 MRPS34P82930 218 aaKnown RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM128Q5BJH2 165 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 RAET1LQ5VY80 246 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 SLC16A14Q7RTX9 510 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 PDZD9Q8IXQ8 264 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 KCNRGQ8N5I3 272 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM156Q8N614 296 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 GVQW1Q8N7I0 195 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM185AQ8NFB2 350 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 OR9K2Q8NGE7 335 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 OR52H1Q8NGJ2 320 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 FBXW5Q969U6 566 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 WDR89Q96FK6 387 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 FAM71F1Q96KD3 344 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 GPER1Q99527 375 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 PDCD10Q9BUL8 212 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 DNTTIP1Q9H147 329 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 AKIRIN1Q9H9L7 192 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 SHPKQ9UHJ6 478 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 FOXD3Q9UJU5 478 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 TNFSF18Q9UNG2 199 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 MFSD2BA6NFX1 497 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 SERPINE3A8MV23 424 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 B4E171 279 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 MFNGO00587 321 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 EFSO43281 561 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 MPIG6BO95866 241 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 OPN1LWP04000 364 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 CCL3P10147 92 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 ACP1P24666 158 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 TSPAN7P41732 249 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 TAS2R46P59540 309 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 RAC3P60763 192 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 PPP1R1AQ13522 171 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 TRIP6Q15654 476 aaKnown RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 KISS1Q15726 138 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 SGCAQ16586 387 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 NKPD1Q17RQ9 610 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 FAM27BQ5VT28 67 aa11.36□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 HSD17B13Q7Z5P4 300 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-205ENST00000553474 PIP4P1Q86T03 277 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms