RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PAPOLGQ9BWT3 736 aaKnown RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 DGCR6LQ9BY27 220 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 HOXD1Q9GZZ0 328 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CDC42EP4Q9H3Q1 356 aaKnown RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 REEP4Q9H6H4 257 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PTGES2Q9H7Z7 377 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MTHFD2LQ9H903 347 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MYOZ1Q9NP98 299 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 B3GAT2Q9NPZ5 323 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SDHAF3Q9NRP4 125 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF275Q9NSD4 429 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 C1orf109Q9NX04 203 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 AHSPQ9NZD4 102 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF319Q9P2F9 582 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 CHRNA9Q9UGM1 479 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SNX6Q9UNH7 406 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 PPP1R3CQ9UQK1 317 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 MRPS28Q9Y2Q9 187 aaKnown RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 SH3GLB1Q9Y371 365 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 HDGFL3Q9Y3E1 203 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 POLR3HQ9Y535 204 aaPredicted RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ANGPTL3Q9Y5C1 460 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF780BQ9Y6R6 833 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
CPSF6-207ENST00000551516 WNK2Q9Y3S1 2297 aa1.91□□□□□ -2.1
CPSF6-207ENST00000551516 IGKV1D-43A0A0B4J1Z2 117 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 MEIOCA2RUB1 952 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CFAP73A6NFT4 308 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 H0YL77 283 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CHEK1O14757 476 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SCAMP2O15127 329 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TM9SF1O15321 606 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TYROBPO43914 113 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 MGRN1O60291 552 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ERLIN1O75477 346 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 MTRF1O75570 445 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 LGI1O95970 557 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 KRT6AP02538 564 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 AMBPP02760 352 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 KRT6BP04259 564 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SHBGP04278 402 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 LYNP07948 512 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TFPTP0C1Z6 253 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 PABPC4LP0CB38 370 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 PPIAL4GP0DN37 164 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 B4GALT1P15291 398 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SELEP16581 610 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 HOXB6P17509 224 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 C4BPBP20851 252 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 PRKACGP22612 351 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 AHCYP23526 432 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 IL32P24001 234 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 PRTN3P24158 256 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 HTR2AP28223 471 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 GPR183P32249 361 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CD80P33681 288 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 GLRXP35754 106 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 PMELP40967 661 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CDKN2CP42773 168 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CRYBB2P43320 205 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ALDH3B1P43353 468 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 KRT6CP48668 564 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CCT3P49368 545 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SERPINB8P50452 374 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CNN1P51911 297 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 PLTPP55058 493 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CTBP2P56545 445 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CLDN8P56748 225 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ERVS71-1P61550 626 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 GNB1P62873 340 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CYCSP99999 105 aaKnown RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 GGTLC2Q14390 218 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 GK2Q14410 553 aaPredicted RBP1.9□□□□□ -2.11
CPSF6-207ENST00000551516 STK11Q15831 433 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ALKBH6Q3KRA9 238 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 KRTAP27-1Q3LI81 207 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SPANXN4Q5MJ08 99 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TEX35Q5T0J7 233 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 DDI2Q5TDH0 399 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 LIPNQ5VXI9 398 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 C3orf33Q6P1S2 294 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 LEG1Q6P5S2 330 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 Q6ZVQ6 151 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 GRINAQ7Z429 371 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 MSRB3Q8IXL7 192 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 C20orf196Q8IYI0 205 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 CLECL1Q8IZS7 167 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 KDM8Q8N371 416 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SVOPLQ8N434 492 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 MMGT1Q8N4V1 131 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ANKFN1Q8N957 763 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM185AQ8NFB2 350 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 OR9K2Q8NGE7 335 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 OR8J2Q8NGG1 315 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 OR4A16Q8NH70 328 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 C8orf46Q8TAG6 207 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 FBXO30Q8TB52 745 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 SFXN5Q8TD22 340 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 GPR151Q8TDV0 419 aa1.9□□□□□ -2.11
CPSF6-207ENST00000551516 ACMSDQ8TDX5 336 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms