RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 COL8A2P25067 703 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 CHATP28329 748 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 LAP3P28838 519 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 GGT2P36268 569 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ARR3P36575 388 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 SLC9A3P48764 834 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ERVK-25P63136 954 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 GNGT1P63211 74 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 TGFBR3Q03167 851 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ARL16Q0P5N6 197 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 PPP1R8Q12972 351 aaKnown RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 KRR1Q13601 381 aaKnown RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 C1DQ13901 141 aaKnown RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 TRAM2Q15035 370 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 TAF11Q15544 211 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 MEP1BQ16820 701 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 PABPC1L2AQ5JQF8 200 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 LINC01590Q5TEZ4 76 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 FAM27BQ5VT28 67 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 LCN8Q6JVE9 175 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF774Q6NX45 483 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF620Q6ZNG0 422 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 CFAP77Q6ZQR2 320 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 PIWIL3Q7Z3Z3 882 aaKnown RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ARPINQ7Z6K5 226 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 HIPK1Q86Z02 1210 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 PHC2Q8IXK0 858 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 SLC26A10Q8NG04 563 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 OR4F15Q8NGB8 312 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 OR9Q2Q8NGE9 314 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 OR4Q3Q8NH05 313 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 OR51A7Q8NH64 312 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 SECTM1Q8WVN6 248 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 PROX1Q92786 737 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 TRIM63Q969Q1 353 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 SLCO4A1Q96BD0 722 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 RSRC1Q96IZ7 334 aaKnown RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 HOPXQ9BPY8 73 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 KCTD14Q9BQ13 255 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ALG12Q9BV10 488 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 NMNAT2Q9BZQ4 307 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 OR2H1Q9GZK4 316 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 FGF23Q9GZV9 251 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-214ENST00000550893 FAM107BQ9H098 131 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 SYT4Q9H2B2 425 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 FN3KQ9H479 309 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ANKRD19PQ9H560 264 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 ARMC7Q9H6L4 198 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 NGBQ9NPG2 151 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 HSF4Q9ULV5 492 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 MED31Q9Y3C7 131 aa4.06□□□□□ -1.76
SCAF11-214ENST00000550893 PRSS37A4D1T9 235 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 GMNCA6NCL1 334 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 E9PQ18 207 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 MLNRO43193 412 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 XPNPEP2O43895 674 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 UBL3O95164 117 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 GAS8-AS1O95177 125 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 BCL10O95999 233 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 IGHV1-46P01743 117 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 IGHV3-13P01766 116 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 CRYAAP02489 173 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 H1F0P07305 194 aaKnown RBP4.05□□□□□ -1.76
SCAF11-214ENST00000550893 ADRA2AP08913 450 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 CST2P09228 141 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 OR8G3PP0DMU2 310 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 CD79AP11912 226 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 HIST1H1CP16403 213 aaKnown RBP4.05□□□□□ -1.76
SCAF11-214ENST00000550893 SELEP16581 610 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF23P17027 643 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 TCN1P20061 433 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-214ENST00000550893 NPR2P20594 1047 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 OTX1P32242 354 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-214ENST00000550893 PMELP40967 661 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 RPS27P42677 84 aaKnown RBP4.05□□□□□ -1.76
SCAF11-214ENST00000550893 EVX1P49640 407 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 CDH15P55291 814 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 EFNB1P98172 346 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 PAX2Q02962 417 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 GLO1Q04760 184 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 ST3GAL3Q11203 375 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 PCK2Q16822 640 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 MMEL1Q495T6 779 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 ZBED5Q49AG3 693 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 SPATA46Q5T0L3 261 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 GLYATQ6IB77 296 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 C1orf94Q6P1W5 598 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 GSG1LQ6UXU4 331 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 ABHD12BQ7Z5M8 362 aaPredicted RBP4.05□□□□□ -1.76
SCAF11-214ENST00000550893 SMIM29Q86T20 159 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 DEFB107AQ8IZN7 70 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 HS3ST5Q8IZT8 346 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 OR6V1Q8N148 313 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 ZNF786Q8N393 782 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 LRRC18Q8N456 261 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 C10orf53Q8N6V4 93 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 PCYOX1LQ8NBM8 494 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 NPEPL1Q8NDH3 523 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 SLC30A7Q8NEW0 376 aa4.05□□□□□ -1.76
SCAF11-214ENST00000550893 OR6N1Q8NGY5 312 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms