RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 PIGCQ92535 297 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 CCL17Q92583 94 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 DVL3Q92997 716 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 ITFG2Q969R8 447 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 ADAT1Q9BUB4 502 aaKnown RBP13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 PAPOLGQ9BWT3 736 aaKnown RBP13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 REG4Q9BYZ8 158 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 Q9H521 79 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 CHODLQ9H9P2 273 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 ZNF275Q9NSD4 429 aaPredicted RBP13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 CLEC2DQ9UHP7 191 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 CACNG2Q9Y698 323 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 ACANP16112 2415 aa13.75□□□□□ -0.21
CHMP1A-209ENST00000550872 A0A1B0GVI7 797 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 RNF223E7ERA6 249 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 H3BSH0 61 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 RP2O75695 350 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 DHRS3O75911 302 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 CD99P14209 185 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 GIFP27352 417 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 TMEM33P57088 247 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 NANOS3P60323 173 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 RIPPLY1Q0D2K3 151 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 MRPL28Q13084 256 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 ALKBH1Q13686 389 aaKnown RBP13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 OR2G6Q5TZ20 316 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 DOK3Q7L591 496 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 MYDGFQ969H8 173 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 RASSF4Q9H2L5 321 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 FKBP14Q9NWM8 211 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 FRRS1LQ9P0K9 344 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 PPP1R3CQ9UQK1 317 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 PIGLQ9Y2B2 252 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 TPRKBQ9Y3C4 175 aa13.74□□□□□ -0.21
CHMP1A-209ENST00000550872 DYSFO75923 2080 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 ZNF816-ZNF321PA0A0X1KG74 233 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 ANXA2P2A6NMY6 339 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 ZNF850A8MQ14 1090 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 VWC2LB2RUY7 222 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 E9PI62 339 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 SMAD7O15105 426 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 PPIHO43447 177 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 SYT7O43581 403 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 CST4P01036 141 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 CCDC159P0C7I6 412 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 UBCP0CG48 685 aaKnown RBP13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 C21orf33P30042 268 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 CD200P41217 278 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 GPR6P46095 362 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 CCR9P51686 369 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 MZT1Q08AG7 82 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 PRDX4Q13162 271 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 MAB21L1Q13394 359 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 RIN1Q13671 783 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 TMEM244Q5VVB8 128 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 RDH10Q8IZV5 341 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 CIARTQ8N365 385 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 CELF2-AS1Q8N7Q2 184 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 PLPP7Q8NBV4 271 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 OR14K1Q8NGZ2 314 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 HAVCR2Q8TDQ0 301 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 TMUB1Q9BVT8 246 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 BPESC1Q9GZL8 116 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 PPP1R3EQ9H7J1 279 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 C14orf119Q9NWQ9 140 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 MPC1Q9Y5U8 109 aa13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 MAP1AP78559 2803 aaPredicted RBP13.73□□□□□ -0.21
CHMP1A-209ENST00000550872 NIPBLQ6KC79 2804 aaeCLIP13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 LOC107986453A0A1B0GWG9 222 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 CDK1P06493 297 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 FAHP16930 419 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 CCL1P22362 96 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 NR4A2P43354 598 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 TGM4P49221 684 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 GTF2A1P52655 376 aaPredicted RBP13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 SLC3A1Q07837 685 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 ZBTB37Q5TC79 503 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 PRAMEF6Q5VXH4 476 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 MOGAT3Q86VF5 341 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 ZNF676Q8N7Q3 588 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 GATAD2BQ8WXI9 593 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 HIST1H2AAQ96QV6 131 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 MICU1Q9BPX6 476 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 GCM1Q9NP62 436 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 TMEM106BQ9NUM4 274 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 BABAM2Q9NXR7 383 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 ENPP5Q9UJA9 477 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 PCDHGB5Q9Y5G0 923 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 V9GYS6 101 aa13.72□□□□□ -0.21
CHMP1A-209ENST00000550872 FLNAP21333 2647 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 OR4C45A6NMZ5 311 aa13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 CLDN25C9JDP6 229 aa13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 MYL12BO14950 172 aa13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 DENRO43583 198 aaKnown RBP13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 GRPP07492 148 aa13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 Q6ZSR3 168 aa13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 MOB3CQ70IA8 216 aa13.71□□□□□ -0.21
CHMP1A-209ENST00000550872 ZDHHC23Q8IYP9 409 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms