RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 CX3CR1P49238 355 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 GK3PQ14409 553 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 ZNF826PQ6ZT77 177 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 Q6ZTK2 550 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 SLC16A9Q7RTY1 509 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 PGAM4Q8N0Y7 254 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 C8orf46Q8TAG6 207 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 TAF15Q92804 592 aaKnown RBP eCLIP11.72□□□□□ -0.53
TPCN1-213ENST00000550543 REEP6Q96HR9 211 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 PAPOLGQ9BWT3 736 aaKnown RBP11.72□□□□□ -0.53
TPCN1-213ENST00000550543 TLNRD1Q9H1K6 362 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 METTL8Q9H825 291 aaKnown RBP11.72□□□□□ -0.53
TPCN1-213ENST00000550543 ZNRD1Q9P1U0 126 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 N6AMT1Q9Y5N5 214 aa11.72□□□□□ -0.53
TPCN1-213ENST00000550543 A0A1W2PPH5 198 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 RNASEK-C17orf49H0YIS7 233 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 TNFRSF11BO00300 401 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 NPFFO15130 113 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 CCNB2O95067 398 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 CSF1P09603 554 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 PAICSP22234 425 aaKnown RBP11.71□□□□□ -0.53
TPCN1-213ENST00000550543 MNAT1P51948 309 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 UBE2E1P51965 193 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 FAM3AP98173 230 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 SRSF4Q08170 494 aaKnown RBP11.71□□□□□ -0.53
TPCN1-213ENST00000550543 WDR38Q5JTN6 314 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 C16orf89Q6UX73 402 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 WDR82Q6UXN9 313 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 SLC37A3Q8NCC5 494 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 OR5D13Q8NGL4 314 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 OR9Q1Q8NGQ5 310 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 OR6K6Q8NGW6 343 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 HIST1H2AAQ96QV6 131 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 DDOQ99489 341 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 CCL13Q99616 98 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 MYLK2Q9H1R3 596 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 RASSF4Q9H2L5 321 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.53
TPCN1-213ENST00000550543 SF3B6Q9Y3B4 125 aaKnown RBP11.71□□□□□ -0.53
TPCN1-213ENST00000550543 TGP01266 2768 aa11.71□□□□□ -0.54
TPCN1-213ENST00000550543 IGHV3OR15-7A0A075B7D8 119 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 TRBV23-1A0A0A0MS06 115 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 DHRS12A0PJE2 317 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 ARPC2O15144 300 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 SPI1P17947 270 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 GABRA5P31644 462 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 TGM4P49221 684 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 CAV3P56539 151 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 EIF2B1Q14232 305 aaKnown RBP11.7□□□□□ -0.54
TPCN1-213ENST00000550543 AANATQ16613 207 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 LIAT1Q6ZQX7 453 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 Q6ZSV7 163 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.7□□□□□ -0.54
TPCN1-213ENST00000550543 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 RNF148Q8N7C7 305 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 RNF133Q8WVZ7 376 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 INTS14Q96SY0 518 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 TSSK6Q9BXA6 273 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 EGLN3Q9H6Z9 239 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 NIPAL2Q9H841 368 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 LYVE1Q9Y5Y7 322 aa11.7□□□□□ -0.54
TPCN1-213ENST00000550543 hCG_38984A0A1B0GV85 526 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 hCG_1809904A0A1W2PP81 198 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 A0A1W2PPE2 198 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 A0A1W2PQ09 198 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 A0A1W2PR64 198 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 A0A1W2PRV1 198 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 SLC2A1P11166 492 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 RPS27P42677 84 aaKnown RBP11.69□□□□□ -0.54
TPCN1-213ENST00000550543 GSK3AP49840 483 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 IKZF1Q13422 519 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 CRMP1Q14194 572 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 STUMQ69YW2 141 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 OR51L1Q8NGJ5 315 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 H1FXQ92522 213 aaKnown RBP11.69□□□□□ -0.54
TPCN1-213ENST00000550543 SGK3Q96BR1 496 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 PGAM5Q96HS1 289 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 NMNAT2Q9BZQ4 307 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 MUC13Q9H3R2 512 aa11.69□□□□□ -0.54
TPCN1-213ENST00000550543 RANBP3Q9H6Z4 567 aaPredicted RBP11.69□□□□□ -0.54
TPCN1-213ENST00000550543 SLC25A10Q9UBX3 287 aaPredicted RBP11.69□□□□□ -0.54
TPCN1-213ENST00000550543 VWFP04275 2813 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 ZNF816-ZNF321PA0A0X1KG74 233 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 MEIOCA2RUB1 952 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 ACOT8O14734 319 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 CDIPTO14735 213 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 GLCEO94923 617 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 CST4P01036 141 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 H2BFMP0C1H6 154 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 POU1F1P28069 291 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 GSTT1P30711 240 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 ZNF121P58317 390 aaPredicted RBP11.68□□□□□ -0.54
TPCN1-213ENST00000550543 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 FAM57BQ71RH2 274 aa11.68□□□□□ -0.54
TPCN1-213ENST00000550543 C11orf53Q8IXP5 236 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms