RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 ARHGEF39Q8N4T4 335 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 CMTM3Q96MX0 182 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 C4orf17Q53FE4 359 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF385BQ569K4 471 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 PDGFAP04085 211 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 IAPPP10997 89 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 GFRALQ6UXV0 394 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 C17orf107Q6ZR85 190 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 OR13C5Q8NGS8 318 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 TTC9Q92623 222 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 FBXW5Q969U6 566 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 FOXQ1Q9C009 403 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 GABRB1P18505 474 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 OR4S1Q8NGB4 309 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 CCL4L1Q8NHW4 92 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 TMPRSS5Q9H3S3 457 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 BCL2L10Q9HD36 194 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 CLEC18AA5D8T8 446 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 OR4E1P0C645 316 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 INSM1Q01101 510 aaPredicted RBP11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 CLEC18CQ8NCF0 446 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 OR5M8Q8NGP6 311 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 GLI3P10071 1580 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 A0A1W2PPC4 97 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 KLK8O60259 260 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 PDGFBP01127 241 aaPredicted RBP11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 FCER1GP30273 86 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 SLC25A26Q70HW3 274 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 LINC01465Q8N7H1 131 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 AAMDCQ9H7C9 122 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 CLEC1BQ9P126 229 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 TSPAN12O95859 305 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 SLC19A1P41440 591 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 GP2P55259 537 aaKnown RBP11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 GPR32P1Q8NGA4 272 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 TVP23CQ96ET8 276 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 MED29Q9NX70 200 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 LILRA5A6NI73 299 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 ICMTO60725 284 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SMIM18P0DKX4 95 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 DGAT2L6Q6ZPD8 337 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 CABLES2Q9BTV7 478 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 NCBP2LA6PVI3 153 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 CDK5R1Q15078 307 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 RTN4RL1Q86UN2 441 aaPredicted RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 PP6455Q8WZ26 134 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 MRPL22Q9NWU5 206 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 NYNRINQ9P2P1 1898 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SPTBN2O15020 2390 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 HPP00738 406 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 RPL13AP40429 203 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 OR2G2Q8NGZ5 317 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SMIM7Q9BQ49 75 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 NTF3P20783 257 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 IL11RAQ14626 422 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 DTWD2Q8NBA8 298 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 CLDN23Q96B33 292 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SLCO1C1Q9NYB5 712 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 GFERP55789 205 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 TRILQ7L0X0 811 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 AKR1E2Q96JD6 320 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SPP1P10451 314 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 EVX1P49640 407 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 CLDN20P56880 219 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SPEM1Q8N4L4 309 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 OR10G3Q8NGC4 313 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 ALKBH3Q96Q83 286 aaPredicted RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 FOXJ3Q9UPW0 622 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 B4GALT3O60512 393 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 GLI4P10075 376 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 ABCD3P28288 659 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 CCL7P80098 99 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 SPATA46Q5T0L3 261 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 OR5AP2Q8NGF4 316 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 LHX4Q969G2 390 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 RPUSD4Q96CM3 377 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 MGAMO43451 1857 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 RSPO2Q6UXX9 243 aaPredicted RBP11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 OR2Z1Q8NG97 314 aa11.28□□□□□ -0.6
RAB3IP-212ENST00000550536 HELZP42694 1942 aaKnown RBP11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 FBP1P09467 338 aa11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 TNFRSF1AP19438 455 aa11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 RAB1AP62820 205 aa11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 OR1F12Q8NHA8 337 aa11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF646O15015 1829 aaPredicted RBP11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 DBX1A6NMT0 343 aa11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.6
RAB3IP-212ENST00000550536 TRGV8A0A0C4DH27 118 aa11.27□□□□□ -0.61
RAB3IP-212ENST00000550536 RFC3P40938 356 aa11.27□□□□□ -0.61
RAB3IP-212ENST00000550536 MMP15P51511 669 aa11.27□□□□□ -0.61
RAB3IP-212ENST00000550536 LCN15Q6UWW0 184 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms