RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 EGLN3Q9H6Z9 239 aa6.29□□□□□ -1.4
NEK3-201ENST00000550331 RNPEPL1Q9HAU8 725 aa6.29□□□□□ -1.4
NEK3-201ENST00000550331 IL1RAPQ9NPH3 570 aa6.29□□□□□ -1.4
NEK3-201ENST00000550331 ZNF446Q9NWS9 450 aa6.29□□□□□ -1.4
NEK3-201ENST00000550331 IL20Q9NYY1 176 aa6.29□□□□□ -1.4
NEK3-201ENST00000550331 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
NEK3-201ENST00000550331 BAIAP2Q9UQB8 552 aa6.29□□□□□ -1.4
NEK3-201ENST00000550331 KPTNQ9Y664 436 aa6.29□□□□□ -1.4
NEK3-201ENST00000550331 A0A0U1RQK1 487 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 C5orf63A6NC05 138 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 TVP23AA6NH52 213 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 ZNF878C9JN71 531 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 ARPC2O15144 300 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 FCN3O75636 299 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 TIPRLO75663 272 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 CLPXO76031 633 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 IGHV4-59P01825 116 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 PSKH1P11801 424 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 ANOS1P23352 680 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 CFL1P23528 166 aaKnown RBP6.28□□□□□ -1.4
NEK3-201ENST00000550331 FMO3P31513 532 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SLC15A1P46059 708 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 ENTPD1P49961 510 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 BLVRAP53004 296 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SLC25A1P53007 311 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 PROK1P58294 105 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 ARF6P62330 175 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 GRB2P62993 217 aaKnown RBP6.28□□□□□ -1.4
NEK3-201ENST00000550331 SRSF4Q08170 494 aaKnown RBP6.28□□□□□ -1.4
NEK3-201ENST00000550331 TAF13Q15543 124 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 MICBQ29980 383 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SPATS1Q496A3 300 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SAMD4BQ5PRF9 694 aaKnown RBP6.28□□□□□ -1.4
NEK3-201ENST00000550331 GDPGP1Q6ZNW5 385 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 ZNF826PQ6ZT77 177 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 RHOUQ7L0Q8 258 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SLC16A9Q7RTY1 509 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SLC36A1Q7Z2H8 476 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 PGAM4Q8N0Y7 254 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 LNX2Q8N448 690 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 CYB561A3Q8NBI2 242 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SCCPDHQ8NBX0 429 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SLC37A3Q8NCC5 494 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 LINC01006Q8NI28 216 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 NPRL2Q8WTW4 380 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 ZNRF4Q8WWF5 429 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 RASSF4Q9H2L5 321 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 TOR3AQ9H497 397 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 CNTD2Q9H8S5 307 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 SP140LQ9H930 580 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 MED4Q9NPJ6 270 aa6.28□□□□□ -1.4
NEK3-201ENST00000550331 CAB39Q9Y376 341 aaPredicted RBP6.28□□□□□ -1.4
NEK3-201ENST00000550331 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 ZNF593O00488 134 aaPredicted RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 APOC1P02654 83 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 SLC2A1P11166 492 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 SPI1P17947 270 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 NAA10P41227 235 aaPredicted RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 CX3CR1P49238 355 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 PRKXP51817 358 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 FAM3AP98173 230 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 CRMP1Q14194 572 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 SNCBQ16143 134 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 TAF9Q16594 264 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 TIGD6Q17RP2 521 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 WDR38Q5JTN6 314 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 ZNF770Q6IQ21 691 aaPredicted RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 WDR82Q6UXN9 313 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 RASSF6Q6ZTQ3 369 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 VMO1Q7Z5L0 202 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 WDR86Q86TI4 376 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 C11orf53Q8IXP5 236 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 CMTM4Q8IZR5 234 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 GALNT4Q8N4A0 578 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 FTMTQ8N4E7 242 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 ZSCAN4Q8NAM6 433 aaPredicted RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 OR2T33Q8NG76 320 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 OR1M1Q8NGA1 313 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 OR9Q2Q8NGE9 314 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 OR52H1Q8NGJ2 320 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 OR51L1Q8NGJ5 315 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 OR8D4Q8NGM9 314 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 OR9Q1Q8NGQ5 310 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 LRRC29Q8WV35 223 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 ST8SIA4Q92187 359 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 UBE2FQ969M7 185 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 REEP6Q96HR9 211 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 RBM4BQ9BQ04 359 aaKnown RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 ELAC2Q9BQ52 826 aaKnown RBP6.27□□□□□ -1.41
NEK3-201ENST00000550331 BTBD10Q9BSF8 475 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 NMNAT2Q9BZQ4 307 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 TLNRD1Q9H1K6 362 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 RGCCQ9H4X1 137 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 ABCB9Q9NP78 766 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 CENPMQ9NSP4 180 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 TBC1D23Q9NUY8 699 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 NDE1Q9NXR1 346 aa6.27□□□□□ -1.41
NEK3-201ENST00000550331 VPREB3Q9UKI3 123 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms