RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 DNTTIP1Q9H147 329 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 VNN3Q9NY84 501 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 IGHV3OR16-10A0A075B7F0 116 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 FAM183AA6NL82 134 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 TMEM210A6NLX4 147 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 SRRM5B3KS81 715 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 C22orf46C9J442 243 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 GYG2O15488 501 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 CST4P01036 141 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 PSKH1P11801 424 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 EGR1P18146 543 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 RPL15P61313 204 aaKnown RBP9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 KLHL12Q53G59 568 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 ATPAF1Q5TC12 328 aaPredicted RBP9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 PLBD1Q6P4A8 553 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 KCTD18Q6PI47 426 aaPredicted RBP9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 Q6YL49 198 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF826PQ6ZT77 177 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 CMTM4Q8IZR5 234 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 PAPD5Q8NDF8 572 aaKnown RBP9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 C19orf18Q8NEA5 215 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR10Z1Q8NGY1 313 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 THEM6Q8WUY1 208 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 LRRC29Q8WV35 223 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 CANT1Q8WVQ1 401 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 C1orf147Q96MC9 270 aaPredicted RBP9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 HIST1H2AAQ96QV6 131 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 PCGF1Q9BSM1 259 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 RTL8AQ9BWD3 113 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 PAPOLGQ9BWT3 736 aaKnown RBP9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRRG3Q9BZD7 231 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 SLITRK2Q9H156 845 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 TLNRD1Q9H1K6 362 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF696Q9H7X3 374 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 CNTD2Q9H8S5 307 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 DNAJB9Q9UBS3 223 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 MMP24Q9Y5R2 645 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 KPTNQ9Y664 436 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 POMT1Q9Y6A1 747 aa9.03□□□□□ -0.96
VTI1BP3-201ENST00000550220 C5orf63A6NC05 138 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 DVL1O14640 695 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 NDUFB3O43676 98 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 GYPAP02724 150 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 ATP6V1B1P15313 513 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 DCTDP32321 178 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 RPS7P62081 194 aaKnown RBP9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 CDK5Q00535 292 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 FLOT2Q14254 428 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 LRRC10Q5BKY1 277 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 PRR31Q5SQ13 230 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 BTN2A1Q7KYR7 527 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 TRPM8Q7Z2W7 1104 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 SPATA24Q86W54 205 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 FAM90A1Q86YD7 464 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 CPOQ8IVL8 374 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 IQCF1Q8N6M8 205 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 TBC1D15Q8TC07 691 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 NPRL2Q8WTW4 380 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 CLPTM1LQ96KA5 538 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 DUX5Q96PT3 197 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 MROQ9BYG7 248 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 YIPF3Q9GZM5 350 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 MED20Q9H944 212 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 UNKLQ9H9P5 680 aaKnown RBP9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 DNAJC27Q9NZQ0 273 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 LAMP5Q9UJQ1 280 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 CAB39Q9Y376 341 aaPredicted RBP9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 RHBDD3Q9Y3P4 386 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 PCDHGB1Q9Y5G3 927 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 TMEM14AQ9Y6G1 99 aa9.02□□□□□ -0.97
VTI1BP3-201ENST00000550220 CENPVL3A0A0U1RRI6 287 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 A0A1B0GVI7 797 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 CDIPTO14735 213 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 HOXA3O43365 443 aaPredicted RBP9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 ZNF254O75437 659 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 MMP9P14780 707 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 ALOX5APP20292 161 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 MAP2K3P46734 347 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 PSMA6P60900 246 aaKnown RBP9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 ACTR3P61158 418 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 CBX1P83916 185 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 DEFB112Q30KQ8 113 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 GFOD2Q3B7J2 385 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 CDONQ4KMG0 1287 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 FAM76BQ5HYJ3 339 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 LCN1P1Q5VSP4 162 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 WDR82Q6UXN9 313 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 BRD3OSQ6XYD6 125 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 KRT74Q7RTS7 529 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 KRT77Q7Z794 578 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR4F5Q8NH21 305 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 SSMEM1Q8WWF3 244 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 ASB17Q8WXJ9 295 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 OR5P3Q8WZ94 311 aa9.01□□□□□ -0.97
VTI1BP3-201ENST00000550220 ST8SIA4Q92187 359 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms