RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 NANOGP1Q8N7R0 232 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 OR52N1Q8NH53 320 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 RNF166Q96A37 237 aaPredicted RBP11.34□□□□□ -0.59
NUP188-211ENST00000550219 DCLRE1CQ96SD1 692 aaKnown RBP11.34□□□□□ -0.59
NUP188-211ENST00000550219 KCNJ15Q99712 375 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 TMPRSS13Q9BYE2 586 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 MROQ9BYG7 248 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 CHCHD3Q9NX63 227 aaKnown RBP11.34□□□□□ -0.59
NUP188-211ENST00000550219 PCDHB10Q9UN67 800 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 LRP12Q9Y561 859 aa11.34□□□□□ -0.59
NUP188-211ENST00000550219 TRIM64CA6NLI5 447 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 PSMD9O00233 223 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 MAGEB4O15481 346 aaPredicted RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 ICMTO60725 284 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 SRSF10O75494 262 aaKnown RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 KRT8P05787 483 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 H2BFMP0C1H6 154 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 RIDAP52758 137 aaKnown RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 TNFAIP6P98066 277 aaPredicted RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 ZMAT1Q5H9K5 638 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 SPATC1Q76KD6 591 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 C1QL2Q7Z5L3 287 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 KRT77Q7Z794 578 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 PEG10Q86TG7 708 aaKnown RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 SPARTQ8N0X7 666 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 KLHL36Q8N4N3 616 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 SLC7A6Q92536 515 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 SPTSSAQ969W0 71 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 PELI1Q96FA3 418 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 C4orf36Q96KX1 117 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 C4orf45Q96LM5 186 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 SLC6A7Q99884 636 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 TTTY10Q9BZA0 68 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 POFUT1Q9H488 388 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 ISG20L2Q9H9L3 353 aaKnown RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 CYSLTR2Q9NS75 346 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 DCAF16Q9NXF7 216 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 IKZF2Q9UKS7 526 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 ERGIC3Q9Y282 383 aa11.33□□□□□ -0.6
NUP188-211ENST00000550219 LSM2Q9Y333 95 aaKnown RBP11.33□□□□□ -0.6
NUP188-211ENST00000550219 ACOD1A6NK06 481 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 TRIM77I1YAP6 450 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 DBHP09172 617 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 ACSM4P0C7M7 580 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 CFPP27918 469 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 HILS1P60008 231 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 SLC3A1Q07837 685 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 TAF13Q15543 124 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 TBCEQ15813 527 aaPredicted RBP11.32□□□□□ -0.6
NUP188-211ENST00000550219 TP53I3Q53FA7 332 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 OR2G6Q5TZ20 316 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 FDX2Q6P4F2 183 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 ARL9Q6T311 187 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 DRAM2Q6UX65 266 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 TMPRSS11AQ6ZMR5 421 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 PRSS45Q7RTY3 260 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.32□□□□□ -0.6
NUP188-211ENST00000550219 BPIFB2Q8N4F0 458 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 TSPAN14Q8NG11 270 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 SPRYD4Q8WW59 207 aaPredicted RBP11.32□□□□□ -0.6
NUP188-211ENST00000550219 C22orf15Q8WYQ4 148 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 CCDC90BQ9GZT6 254 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 ANK2Q01484 3957 aa11.32□□□□□ -0.6
NUP188-211ENST00000550219 TANC2Q9HCD6 1990 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 A0A087WXM4 84 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 F5H5K5 113 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 H3BSA7 217 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 J3QLI3 93 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 J3QLW9 94 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 M0R135 149 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 APOC1P02654 83 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 ZNF19P17023 458 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 LIPAP38571 399 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 MAP2K4P45985 399 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 MMP16P51512 607 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 PRKXP51817 358 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 TPTEP56180 551 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 WNT4P56705 351 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
NUP188-211ENST00000550219 EMX1Q04741 257 aaPredicted RBP11.31□□□□□ -0.6
NUP188-211ENST00000550219 ACSM1Q08AH1 577 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 PSG7Q13046 419 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
NUP188-211ENST00000550219 DOC2BQ14184 412 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 FAM220AQ7Z4H9 259 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 SVOPQ8N4V2 548 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 YIPF7Q8N8F6 280 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 OR2Z1Q8NG97 314 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 ZFAND2BQ8WV99 257 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 RORBQ92753 470 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 GCDHQ92947 438 aaPredicted RBP11.31□□□□□ -0.6
NUP188-211ENST00000550219 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 DIRC2Q96SL1 478 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 MND1Q9BWT6 205 aa11.31□□□□□ -0.6
NUP188-211ENST00000550219 SUCNR1Q9BXA5 334 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms