RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 RNF166Q96A37 237 aaPredicted RBP16.35■□□□□ 0.21
DDX54-207ENST00000550016 C4orf36Q96KX1 117 aa16.35■□□□□ 0.21
DDX54-207ENST00000550016 ZNF649Q9BS31 505 aa16.35■□□□□ 0.21
DDX54-207ENST00000550016 PAPOLGQ9BWT3 736 aaKnown RBP16.35■□□□□ 0.21
DDX54-207ENST00000550016 GSX1Q9H4S2 264 aaPredicted RBP16.35■□□□□ 0.21
DDX54-207ENST00000550016 TMEM106BQ9NUM4 274 aa16.35■□□□□ 0.21
DDX54-207ENST00000550016 MPC1Q9Y5U8 109 aa16.35■□□□□ 0.21
DDX54-207ENST00000550016 IGHV3-64DA0A0J9YX35 117 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 A0A1B0GTI1 187 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 P2RY10O00398 339 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 MVKQ03426 396 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 RIPPLY1Q0D2K3 151 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 TMEM249Q2WGJ8 235 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 LAIR2Q6ISS4 152 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 KRT74Q7RTS7 529 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 MOGAT3Q86VF5 341 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 SYS1Q8N2H4 156 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 PRSS35Q8N3Z0 413 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 PLPP7Q8NBV4 271 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 SEMA6DQ8NFY4 1073 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 OR2G2Q8NGZ5 317 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 PIGCQ92535 297 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 DVL3Q92997 716 aaPredicted RBP16.34■□□□□ 0.21
DDX54-207ENST00000550016 ERGIC1Q969X5 290 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 PELI1Q96FA3 418 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 ABCB9Q9NP78 766 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 PLCXD1Q9NUJ7 323 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 C14orf119Q9NWQ9 140 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 WIPI2Q9Y4P8 454 aa16.34■□□□□ 0.21
DDX54-207ENST00000550016 MALRD1Q5VYJ5 2156 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 ZNF816-ZNF321PA0A0X1KG74 233 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 LOC100289279A0A1B0GTE1 492 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 LRP5LA4QPB2 252 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 ANXA2P2A6NMY6 339 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 DHRS3O75911 302 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 PTBP3O95758 552 aaKnown RBP16.33■□□□□ 0.2
DDX54-207ENST00000550016 HTR1AP08908 422 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 LIMS3P0CW19 117 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 LIMS4P0CW20 117 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 HSPA13P48723 471 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 PRDX4Q13162 271 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 ZNF181Q2M3W8 571 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 WDR38Q5JTN6 314 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 AVPI1Q5T686 147 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 ZBTB37Q5TC79 503 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 IZUMO2Q6UXV1 221 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 Q6ZSR3 168 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 DOK3Q7L591 496 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 ZNF420Q8TAQ5 688 aaPredicted RBP16.33■□□□□ 0.2
DDX54-207ENST00000550016 GGHQ92820 318 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 PPP1R3EQ9H7J1 279 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 ISG20L2Q9H9L3 353 aaKnown RBP16.33■□□□□ 0.2
DDX54-207ENST00000550016 DCAF16Q9NXF7 216 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 DOCK11Q5JSL3 2073 aa16.33■□□□□ 0.2
DDX54-207ENST00000550016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.33■□□□□ 0.24e-8■■■■■ 29.6
DDX54-207ENST00000550016 EFCAB10A6NFE3 127 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 ZNF850A8MQ14 1090 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 TMEM178BH3BS89 294 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 WNT9BO14905 357 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 CCL1P22362 96 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 PMELP40967 661 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 KIR3DL2P43630 455 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 ETV1P50549 477 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 HNRNPA0Q13151 305 aaKnown RBP16.32■□□□□ 0.2
DDX54-207ENST00000550016 MPPED2Q15777 294 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 ODF4Q2M2E3 257 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 PRAMEF6Q5VXH4 476 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 OR11L1Q8NGX0 322 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 Q8TCH9 128 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 HPS1Q92902 700 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 TMEM80Q96HE8 168 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 MICU1Q9BPX6 476 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 ABCA2Q9BZC7 2435 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 FN3KRPQ9HA64 309 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 UFSP2Q9NUQ7 469 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 CNOT2Q9NZN8 540 aaKnown RBP16.32■□□□□ 0.2
DDX54-207ENST00000550016 FRRS1LQ9P0K9 344 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 DIMT1Q9UNQ2 313 aaKnown RBP16.32■□□□□ 0.2
DDX54-207ENST00000550016 PIGLQ9Y2B2 252 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 EXOSC1Q9Y3B2 195 aaKnown RBP16.32■□□□□ 0.2
DDX54-207ENST00000550016 NPTNQ9Y639 398 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 V9GYS6 101 aa16.32■□□□□ 0.2
DDX54-207ENST00000550016 A0A1B0GVI7 797 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 LRRC30A6NM36 301 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 DHRS7CA6NNS2 312 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 XPNPEP2O43895 674 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 GRPP07492 148 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 UBCP0CG48 685 aaKnown RBP16.31■□□□□ 0.2
DDX54-207ENST00000550016 PIPP12273 146 aaPredicted RBP16.31■□□□□ 0.2
DDX54-207ENST00000550016 FAHP16930 419 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 MYF6P23409 242 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 RBMXP38159 391 aaKnown RBP16.31■□□□□ 0.2
DDX54-207ENST00000550016 VHLP40337 213 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 CCR9P51686 369 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 CSNK2BP67870 215 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 KRTAP1-1Q07627 177 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 ST3GAL4Q11206 333 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 MRPL28Q13084 256 aaKnown RBP16.31■□□□□ 0.2
DDX54-207ENST00000550016 MED21Q13503 144 aa16.31■□□□□ 0.2
DDX54-207ENST00000550016 CCDC54Q8NEL0 328 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms