RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 KCNJ15Q99712 375 aa10.09□□□□□ -0.79
DDX54-206ENST00000549271 NUDT16L1Q9BRJ7 211 aaKnown RBP10.09□□□□□ -0.79
DDX54-206ENST00000549271 CENPMQ9NSP4 180 aa10.09□□□□□ -0.79
DDX54-206ENST00000549271 NECAP2Q9NVZ3 263 aa10.09□□□□□ -0.79
DDX54-206ENST00000549271 CLN8Q9UBY8 286 aa10.09□□□□□ -0.79
DDX54-206ENST00000549271 DYNC2H1Q8NCM8 4307 aaKnown RBP10.08□□□□□ -0.8
DDX54-206ENST00000549271 PTBP3O95758 552 aaKnown RBP10.08□□□□□ -0.8
DDX54-206ENST00000549271 HLA-DPB1P04440 258 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 HMGN1P05114 100 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 IRF2P14316 349 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 GSTT1P30711 240 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 NPY4RP50391 375 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 RASSF2P50749 326 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 PRKXP51817 358 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 MALLQ13021 153 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 MAB21L1Q13394 359 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 PLBD1Q6P4A8 553 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 FAHD1Q6P587 224 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 Q6ZSV7 163 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 ERI1Q8IV48 349 aaKnown RBP10.08□□□□□ -0.8
DDX54-206ENST00000549271 CPOQ8IVL8 374 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 OR2AE1Q8NHA4 323 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 OTULINQ96BN8 352 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 INTS14Q96SY0 518 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 AMELYQ99218 206 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 COPS4Q9BT78 406 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 ABHD6Q9BV23 337 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 SLC22A4Q9H015 551 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 OR51V1Q9H2C8 321 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 C16orf95Q9H693 158 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 ZNF556Q9HAH1 456 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 SLC25A19Q9HC21 320 aa10.08□□□□□ -0.8
DDX54-206ENST00000549271 NOP16Q9Y3C1 178 aaKnown RBP10.08□□□□□ -0.8
DDX54-206ENST00000549271 IGHV3-64DA0A0J9YX35 117 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 CD300LBA8K4G0 201 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 ZNF878C9JN71 531 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 PRR23D1E9PI22 279 aaPredicted RBP10.07□□□□□ -0.8
DDX54-206ENST00000549271 TNFRSF13BO14836 293 aaPredicted RBP10.07□□□□□ -0.8
DDX54-206ENST00000549271 ENSAO43768 121 aaKnown RBP10.07□□□□□ -0.8
DDX54-206ENST00000549271 LIPFP07098 398 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 PRR23D2P0DMB1 279 aaPredicted RBP10.07□□□□□ -0.8
DDX54-206ENST00000549271 SLC2A1P11166 492 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 SLC2A5P22732 501 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 CRISP1P54107 249 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 FGF12P61328 243 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 EIF2B1Q14232 305 aaKnown RBP10.07□□□□□ -0.8
DDX54-206ENST00000549271 TAF13Q15543 124 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 ATP6AP1Q15904 470 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 C11orf91Q3C1V1 193 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 FAM201AQ5SY85 155 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 GLYATL3Q5SZD4 288 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 GPR157Q5UAW9 335 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 CD276Q5ZPR3 534 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 LYPD2Q6UXB3 125 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 PGAP1Q75T13 922 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 PRSS45Q7RTY3 260 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 PLPP7Q8NBV4 271 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 BBS1Q8NFJ9 593 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 OR11L1Q8NGX0 322 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 OR6N2Q8NGY6 317 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 OR5K1Q8NHB7 308 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 RNF133Q8WVZ7 376 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 DUS3LQ96G46 650 aaKnown RBP10.07□□□□□ -0.8
DDX54-206ENST00000549271 WWC2-AS2Q96NR7 200 aa10.07□□□□□ -0.8
DDX54-206ENST00000549271 MMADHCQ9H3L0 296 aaPredicted RBP10.07□□□□□ -0.8
DDX54-206ENST00000549271 C22orf46C9J442 243 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 P2RY10O00398 339 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 SELENOFO60613 162 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 FAM20BO75063 409 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 PAICSP22234 425 aaKnown RBP10.06□□□□□ -0.8
DDX54-206ENST00000549271 CA6P23280 308 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 OPRL1P41146 370 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 GRB2P62993 217 aaKnown RBP10.06□□□□□ -0.8
DDX54-206ENST00000549271 KCNJ8Q15842 424 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 OXLD1Q5BKU9 147 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 SHFQ7M4L6 423 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 MRPL21Q7Z2W9 205 aaKnown RBP10.06□□□□□ -0.8
DDX54-206ENST00000549271 TBC1D15Q8TC07 691 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 SPRYD4Q8WW59 207 aaPredicted RBP10.06□□□□□ -0.8
DDX54-206ENST00000549271 SPSB4Q96A44 273 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 SGK3Q96BR1 496 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 TRIM36Q9NQ86 728 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 PAPOLBQ9NRJ5 636 aaKnown RBP10.06□□□□□ -0.8
DDX54-206ENST00000549271 ZNF319Q9P2F9 582 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 AP4S1Q9Y587 144 aa10.06□□□□□ -0.8
DDX54-206ENST00000549271 ZNF879B4DU55 563 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 LGALS8O00214 317 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 GPR37O15354 613 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 PRODHO43272 600 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 NDUFA2O43678 99 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 GMDSO60547 372 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 MITFO75030 526 aaPredicted RBP10.05□□□□□ -0.8
DDX54-206ENST00000549271 MMP9P14780 707 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 EPHA2P29317 976 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 CFHR2P36980 270 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 SLC15A1P46059 708 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 CX3CR1P49238 355 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 EFNB1P98172 346 aa10.05□□□□□ -0.8
DDX54-206ENST00000549271 PTGES3Q15185 160 aaKnown RBP10.05□□□□□ -0.8
DDX54-206ENST00000549271 MPPED2Q15777 294 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms