RNA–Protein interactions for RNA: ENST00000549064.1

LIMA1-204, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-204ENST00000549064 GSTM3P21266 225 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 GPR12P47775 334 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 NPY4RP50391 375 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ARHGDIAP52565 204 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 SLC35A2P78381 396 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 FMODQ06828 376 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 KLF10Q13118 480 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 SGCAQ16586 387 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 HIST3H3Q16695 136 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ZNF181Q2M3W8 571 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ANXA8L1Q5VT79 327 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ZFAND6Q6FIF0 208 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ARL9Q6T311 187 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ADAMTSL5Q6ZMM2 481 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 BTN2A1Q7KYR7 527 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 RANBP3LQ86VV4 465 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-204ENST00000549064 NUDCD3Q8IVD9 361 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 PAPD5Q8NDF8 572 aaKnown RBP5.25□□□□□ -1.57
LIMA1-204ENST00000549064 NOXO1Q8NFA2 376 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 OR5J2Q8NH18 312 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 OR6S1Q8NH40 331 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 OSR1Q8TAX0 266 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-204ENST00000549064 WIPF2Q8TF74 440 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-204ENST00000549064 SLC38A5Q8WUX1 472 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 C17orf50Q8WW18 174 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 RORBQ92753 470 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 RBMXL1Q96E39 390 aaKnown RBP5.25□□□□□ -1.57
LIMA1-204ENST00000549064 TMEM19Q96HH6 336 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 PPP1R36Q96LQ0 422 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 MAGEB18Q96M61 343 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 CCDC115Q96NT0 180 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 OR5M11Q96RB7 305 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 EPYCQ99645 322 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 NKX3-1Q99801 234 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-204ENST00000549064 OR2H1Q9GZK4 316 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 KCNN2Q9H2S1 579 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 SIAEQ9HAT2 523 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ELOVL3Q9HB03 270 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 TAS2R5Q9NYW4 299 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 ERVK-18Q9QC07 812 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 P2RX2Q9UBL9 471 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 PRDM4Q9UKN5 801 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 STARD10Q9Y365 291 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 CAB39Q9Y376 341 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-204ENST00000549064 UGT2A1Q9Y4X1 527 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 MAB21L2Q9Y586 359 aa5.25□□□□□ -1.57
LIMA1-204ENST00000549064 A0A1B0GVI7 797 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 ELOVL7A1L3X0 281 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 MEIOCA2RUB1 952 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 LRRC30A6NM36 301 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 VCYO14598 125 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 RGS11O94810 467 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 FSTL3O95633 263 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 IGHG1P01857 330 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 CCDC159P0C7I6 412 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 LMO1P25800 156 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 LAP3P28838 519 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 SAA4P35542 130 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 SRP9P49458 86 aaKnown RBP5.24□□□□□ -1.57
LIMA1-204ENST00000549064 CRISP3P54108 245 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 MRPS34P82930 218 aaKnown RBP5.24□□□□□ -1.57
LIMA1-204ENST00000549064 EMX2Q04743 252 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 CCDC153Q494R4 210 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 PRAMEF6Q5VXH4 476 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 OR2T2Q6IF00 324 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 C1orf94Q6P1W5 598 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 ULK3Q6PHR2 472 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 CRIP3Q6Q6R5 217 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 ZNF621Q6ZSS3 439 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 C1orf87Q8N0U7 546 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 C10orf111Q8N326 155 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 BOLLQ8N9W6 283 aaKnown RBP5.24□□□□□ -1.57
LIMA1-204ENST00000549064 DNAJA4Q8WW22 397 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-204ENST00000549064 NSMAFQ92636 917 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 HAVCR1Q96D42 359 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 RAB3IPQ96QF0 476 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-204ENST00000549064 PANX1Q96RD7 426 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 SSX3Q99909 188 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 WFDC6Q9BQY6 131 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 CHID1Q9BWS9 393 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 MRPL13Q9BYD1 178 aaKnown RBP5.24□□□□□ -1.57
LIMA1-204ENST00000549064 ARMC7Q9H6L4 198 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 RANBP3Q9H6Z4 567 aaPredicted RBP5.24□□□□□ -1.57
LIMA1-204ENST00000549064 ZNF702PQ9H963 129 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 PALMDQ9NP74 551 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 INPP5EQ9NRR6 644 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 UFSP2Q9NUQ7 469 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 CALML5Q9NZT1 146 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 ONECUT1Q9UBC0 465 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 BTNL2Q9UIR0 455 aa5.24□□□□□ -1.57
LIMA1-204ENST00000549064 TRAV34A0A0B4J273 112 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 A0A0B4J2E0 115 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 A0A1B0GW55 424 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 A0A1B0GX12 115 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 WDR91A4D1P6 747 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 HSPB6O14558 160 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 HDAC3O15379 428 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 TPST1O60507 370 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 TPST2O60704 377 aa5.23□□□□□ -1.57
LIMA1-204ENST00000549064 TRMUO75648 421 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms