RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 IL1RAPQ9NPH3 570 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 FAM96BQ9Y3D0 163 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 NOTCH3Q9UM47 2321 aa10.59□□□□□ -0.71
PTCH1-218ENST00000548945 C5orf63A6NC05 138 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 BTBD17A6NE02 478 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 TVP23AA6NH52 213 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 TSPAN9O75954 239 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 ANOS1P23352 680 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 CFL1P23528 166 aaKnown RBP10.58□□□□□ -0.72
PTCH1-218ENST00000548945 NAA10P41227 235 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-218ENST00000548945 RPS27P42677 84 aaKnown RBP10.58□□□□□ -0.72
PTCH1-218ENST00000548945 SLC15A1P46059 708 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 PRKXP51817 358 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 HMGA2P52926 109 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 BLVRAP53004 296 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 GRB2P62993 217 aaKnown RBP10.58□□□□□ -0.72
PTCH1-218ENST00000548945 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 TAF13Q15543 124 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 Q6ZSV7 163 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 C11orf53Q8IXP5 236 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 CYB561A3Q8NBI2 242 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 OR1M1Q8NGA1 313 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 STMN2Q93045 179 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 SLAMF6Q96DU3 332 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 DNTTIP1Q9H147 329 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 TOR3AQ9H497 397 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 EGLN3Q9H6Z9 239 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 ZNRD1Q9P1U0 126 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 V9GYQ6 96 aa10.58□□□□□ -0.72
PTCH1-218ENST00000548945 IGHV3OR15-7A0A075B7D8 119 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 ACOT8O14734 319 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 APOC1P02654 83 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 SPARCP09486 303 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 SLC2A1P11166 492 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 PSKH1P11801 424 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 EEF1B2P24534 225 aaKnown RBP10.57□□□□□ -0.72
PTCH1-218ENST00000548945 TGFBR2P37173 567 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 SLC25A1P53007 311 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 FAM3AP98173 230 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 MS4A2Q01362 244 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 SNCBQ16143 134 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 C2orf68Q2NKX9 166 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 WDR38Q5JTN6 314 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 ATPAF1Q5TC12 328 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-218ENST00000548945 DHRS7BQ6IAN0 325 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-218ENST00000548945 LYPD4Q6UWN0 246 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 WDR82Q6UXN9 313 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 C1orf122Q6ZSJ8 110 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 RASSF6Q6ZTQ3 369 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 SLC16A9Q7RTY1 509 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 DPY19L4Q7Z388 723 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 DHFR2Q86XF0 187 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 LNX2Q8N448 690 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 SLC37A3Q8NCC5 494 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 OR52H1Q8NGJ2 320 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 OR5R1Q8NH85 324 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 LRRC29Q8WV35 223 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 ZNRF4Q8WWF5 429 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 LRGUKQ96M69 825 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 NSMCE2Q96MF7 247 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 CCL13Q99616 98 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 PKP2Q99959 881 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 NMNAT2Q9BZQ4 307 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 TLNRD1Q9H1K6 362 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 CENPMQ9NSP4 180 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 ACTR3BQ9P1U1 418 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 ONECUT1Q9UBC0 465 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 BAIAP2Q9UQB8 552 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
PTCH1-218ENST00000548945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-218ENST00000548945 ZNF593O00488 134 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-218ENST00000548945 ARPC2O15144 300 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 NDUFB3O43676 98 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 FKBP6O75344 327 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 MSX2P35548 267 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-218ENST00000548945 TGM4P49221 684 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 POU4F2Q12837 409 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 TIGD6Q17RP2 521 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 LRRC10Q5BKY1 277 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 LCN8Q6JVE9 175 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 WDR86Q86TI4 376 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 GALNT4Q8N4A0 578 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 FTMTQ8N4E7 242 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 CSNK2A3Q8NEV1 391 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 OR51L1Q8NGJ5 315 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 OR9Q1Q8NGQ5 310 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 OR10Z1Q8NGY1 313 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 DCTN5Q9BTE1 182 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 LYVE1Q9Y5Y7 322 aa10.56□□□□□ -0.72
PTCH1-218ENST00000548945 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 A0A1B0GW55 424 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DHRS12A0PJE2 317 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 AQP12BA6NM10 295 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 NPFFO15130 113 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 TBX1O43435 398 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 ATP6V1G2O95670 118 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DUX4L2P0CJ85 424 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms