RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 OR52L1Q8NGH7 329 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 OR2T4Q8NH00 348 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 OR2AE1Q8NHA4 323 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 GNPDA2Q8TDQ7 276 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 SLC7A6OSQ96CW6 309 aaPredicted RBP6.98□□□□□ -1.29
TROAP-208ENST00000548817 SIRPDQ9H106 197 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 VCXQ9H320 206 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 CENPMQ9NSP4 180 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 NDE1Q9NXR1 346 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 ADA2Q9NZK5 511 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 CTSZQ9UBR2 303 aa6.98□□□□□ -1.29
TROAP-208ENST00000548817 RPUSD1Q9UJJ7 312 aaKnown RBP6.98□□□□□ -1.29
TROAP-208ENST00000548817 IGHV3OR15-7A0A075B7D8 119 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 OR6C68A6NDL8 312 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 TVP23AA6NH52 213 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 GSC2O15499 205 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 PTBP3O95758 552 aaKnown RBP6.97□□□□□ -1.29
TROAP-208ENST00000548817 APOC1P02654 83 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 MUC1P15941 1255 aaPredicted RBP6.97□□□□□ -1.29
TROAP-208ENST00000548817 POU1F1P28069 291 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 FMO3P31513 532 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 TGFBR2P37173 567 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 VHLP40337 213 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 SLC15A1P46059 708 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 PRKXP51817 358 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 FXYD6P3P58550 94 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 PSME3P61289 254 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 DCTN2Q13561 401 aaKnown RBP6.97□□□□□ -1.29
TROAP-208ENST00000548817 BLMHQ13867 455 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 TIGD6Q17RP2 521 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 LRRC10Q5BKY1 277 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 GLYATL3Q5SZD4 288 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 FOXB2Q5VYV0 432 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 RPL13AP3Q6NVV1 102 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 HACD2Q6Y1H2 254 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 ZNF826PQ6ZT77 177 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 FAM90A1Q86YD7 464 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 FTMTQ8N4E7 242 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 OR56B2PQ8NGI1 322 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 OR5R1Q8NH85 324 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 LRRC29Q8WV35 223 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 CFHR4Q92496 578 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 H1FXQ92522 213 aaKnown RBP6.97□□□□□ -1.29
TROAP-208ENST00000548817 DMRTB1Q96MA1 342 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 CCL13Q99616 98 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 FN3KQ9H479 309 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 SMURF1Q9HCE7 757 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 DCAF13Q9NV06 445 aaKnown RBP6.97□□□□□ -1.29
TROAP-208ENST00000548817 KAAG1Q9UBP8 84 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 DNAJB11Q9UBS4 358 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 NKX1-2Q9UD57 310 aaPredicted RBP6.97□□□□□ -1.29
TROAP-208ENST00000548817 LRRC42Q9Y546 428 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 V9GYQ6 96 aa6.97□□□□□ -1.29
TROAP-208ENST00000548817 ZNF816-ZNF321PA0A0X1KG74 233 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 NKX6-3A6NJ46 265 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 B2RBV5 119 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 TIPRLO75663 272 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 ANXA2P07355 339 aaKnown RBP6.96□□□□□ -1.3
TROAP-208ENST00000548817 SPARCP09486 303 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 NHLRC4P0CG21 123 aaPredicted RBP6.96□□□□□ -1.3
TROAP-208ENST00000548817 T-ENOLP0DO92 83 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 CFL1P23528 166 aaKnown RBP6.96□□□□□ -1.3
TROAP-208ENST00000548817 HSD11B1P28845 292 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 RRM2P31350 389 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 PYCR1P32322 319 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 GRB2P62993 217 aaKnown RBP6.96□□□□□ -1.3
TROAP-208ENST00000548817 SLC34A1Q06495 639 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 EGR3Q06889 387 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 TSPAN31Q12999 210 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 SNAI3Q3KNW1 292 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 TEX36Q5VZQ5 186 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 PGBD2Q6P3X8 592 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 DCXRQ7Z4W1 244 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 LINC00471Q8N535 108 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 GCSAMQ8N6F7 178 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 FAM86B1Q8N7N1 296 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 DTX3Q8N9I9 347 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 OR9Q1Q8NGQ5 310 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 SLAMF6Q96DU3 332 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 PYURFQ96I23 114 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 MAP6Q96JE9 813 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 C7orf34Q96L11 122 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 DHRS1Q96LJ7 313 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 KCNJ15Q99712 375 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 MICU1Q9BPX6 476 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 FAM234AQ9H0X4 552 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 SPAG4Q9NPE6 437 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 PNRC2Q9NPJ4 139 aaKnown RBP6.96□□□□□ -1.3
TROAP-208ENST00000548817 SIRT7Q9NRC8 400 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 MRPL22Q9NWU5 206 aaKnown RBP6.96□□□□□ -1.3
TROAP-208ENST00000548817 FBLN5Q9UBX5 448 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 VPREB3Q9UKI3 123 aa6.96□□□□□ -1.3
TROAP-208ENST00000548817 HERC2O95714 4834 aa6.95□□□□□ -1.3
TROAP-208ENST00000548817 LCE6AA0A183 80 aa6.95□□□□□ -1.3
TROAP-208ENST00000548817 A0A1W2PQ09 198 aa6.95□□□□□ -1.3
TROAP-208ENST00000548817 A0A1W2PRD5 423 aa6.95□□□□□ -1.3
TROAP-208ENST00000548817 A0A1W2PRF3 423 aa6.95□□□□□ -1.3
TROAP-208ENST00000548817 A0A1W2PRM7 423 aa6.95□□□□□ -1.3
TROAP-208ENST00000548817 MEIOCA2RUB1 952 aa6.95□□□□□ -1.3
TROAP-208ENST00000548817 ANXA2P2A6NMY6 339 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms