RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 CSNK2BP67870 215 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 PRB3Q04118 309 aaPredicted RBP16.37■□□□□ 0.21
GATC-202ENST00000548171 SF3A3Q12874 501 aaKnown RBP eCLIP16.37■□□□□ 0.215e-6■■□□□ 12.5
GATC-202ENST00000548171 KLRD1Q13241 179 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 BLMHQ13867 455 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 SNCBQ16143 134 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 SLC35F1Q5T1Q4 408 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 STUMQ69YW2 141 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 CGB2Q6NT52 195 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 SLC16A9Q7RTY1 509 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 HDXQ7Z353 690 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 CYB561A3Q8NBI2 242 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 OR2T6Q8NHC8 308 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 H1FXQ92522 213 aaKnown RBP16.37■□□□□ 0.21
GATC-202ENST00000548171 SLAMF6Q96DU3 332 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 SP140LQ9H930 580 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 VIPAS39Q9H9C1 493 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 CENPMQ9NSP4 180 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 HAO2Q9NYQ3 351 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 ABCD2Q9UBJ2 740 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 DNAJB11Q9UBS4 358 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 COMMD3-BMI1R4GMX3 469 aa16.37■□□□□ 0.21
GATC-202ENST00000548171 TVP23AA6NH52 213 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 ZNF878C9JN71 531 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 PRB2P02812 416 aaPredicted RBP16.36■□□□□ 0.21
GATC-202ENST00000548171 SPARCP09486 303 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 AMY2BP19961 511 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 CFL1P23528 166 aaKnown RBP16.36■□□□□ 0.21
GATC-202ENST00000548171 GSSP48637 474 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 FAM3AP98173 230 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 SPIBQ01892 262 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 TIGD6Q17RP2 521 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 GLYATQ6IB77 296 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 RPL13AP3Q6NVV1 102 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 FAM86B1Q8N7N1 296 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 OR52L1Q8NGH7 329 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 OR9Q1Q8NGQ5 310 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 PPP1R35Q8TAP8 253 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 MED30Q96HR3 178 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 DDOQ99489 341 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 SIGLEC9Q9Y336 463 aa16.36■□□□□ 0.21
GATC-202ENST00000548171 SF3B6Q9Y3B4 125 aaKnown RBP16.36■□□□□ 0.21
GATC-202ENST00000548171 CDIPTO14735 213 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 TBX1O43435 398 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 XPNPEP2O43895 674 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 GMNNO75496 209 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 FMO3P31513 532 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 GNALP38405 381 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 ENTPD1P49961 510 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 NUDT2P50583 147 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 DLX1P56177 255 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 LOXL3P58215 753 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 GRB2P62993 217 aaKnown RBP16.35■□□□□ 0.21
GATC-202ENST00000548171 IL5RAQ01344 420 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 TSPAN31Q12999 210 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 AANATQ16613 207 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 TEX30Q5JUR7 227 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 PNKDQ8N490 385 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 FTMTQ8N4E7 242 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 KLHDC1Q8N7A1 406 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 CSNK2A3Q8NEV1 391 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 OR10Z1Q8NGY1 313 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 MRAPQ8TCY5 172 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 SEH1LQ96EE3 360 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 REEP6Q96HR9 211 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 RAB3IPQ96QF0 476 aaPredicted RBP16.35■□□□□ 0.21
GATC-202ENST00000548171 SSX3Q99909 188 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 TOR3AQ9H497 397 aa16.35■□□□□ 0.21
GATC-202ENST00000548171 SLC25A10Q9UBX3 287 aaPredicted RBP16.35■□□□□ 0.21
GATC-202ENST00000548171 A0A1W2PQ09 198 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 ANXA2P2A6NMY6 339 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 APOC1P02654 83 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 PSKH1P11801 424 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 CAV3P56539 151 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 ZNF788Q6ZQV5 615 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 C11orf44Q8N8P7 122 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 OR5T2Q8NGG2 359 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 OR52H1Q8NGJ2 320 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 OR51G2Q8NGK0 314 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 OR5D13Q8NGL4 314 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 GNPDA2Q8TDQ7 276 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 SGK3Q96BR1 496 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 CLPTM1LQ96KA5 538 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 MICU1Q9BPX6 476 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 NPFFR1Q9GZQ6 430 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 FOXJ3Q9UPW0 622 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 CDH10Q9Y6N8 788 aa16.34■□□□□ 0.21
GATC-202ENST00000548171 hCG_38984A0A1B0GV85 526 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 ZNF593O00488 134 aaPredicted RBP16.33■□□□□ 0.2
GATC-202ENST00000548171 ANXA2P07355 339 aaKnown RBP16.33■□□□□ 0.2
GATC-202ENST00000548171 CX3CR1P49238 355 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 LRRC75BQ2VPJ9 315 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 LYPD4Q6UWN0 246 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 LIAT1Q6ZQX7 453 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 OR51L1Q8NGJ5 315 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 ZNRF4Q8WWF5 429 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 ITPKCQ96DU7 683 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 RTL8AQ9BWD3 113 aa16.33■□□□□ 0.2
GATC-202ENST00000548171 PAPOLGQ9BWT3 736 aaKnown RBP16.33■□□□□ 0.2
GATC-202ENST00000548171 GORASP2Q9H8Y8 452 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms