RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 CELF2-AS1Q8N7Q2 184 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 OR8S1Q8NH09 359 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 OR5AK2Q8NH90 309 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 PIGCQ92535 297 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 FAM168AQ92567 244 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 PAPOLGQ9BWT3 736 aaKnown RBP11.7□□□□□ -0.54
PTCH1-213ENST00000546820 TRIM36Q9NQ86 728 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 UBAP1Q9NZ09 502 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 ERVK-18Q9QC07 812 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 ENPP5Q9UJA9 477 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 PIGLQ9Y2B2 252 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 RHBDD3Q9Y3P4 386 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 LRRC42Q9Y546 428 aa11.7□□□□□ -0.54
PTCH1-213ENST00000546820 IGHV1-69-2A0A0G2JMI3 117 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 E9PI62 339 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 H0YL77 283 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 IFNL4K9M1U5 179 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 NDUFS8O00217 210 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 MRPS14O60783 128 aaKnown RBP11.69□□□□□ -0.54
PTCH1-213ENST00000546820 LY6HO94772 140 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 SERPINA3P01011 423 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 HLA-DPB1P04440 258 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 CCL1P22362 96 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 KIR3DL2P43630 455 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 CDH15P55291 814 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 TMEM33P57088 247 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 NANOS3P60323 173 aaKnown RBP11.69□□□□□ -0.54
PTCH1-213ENST00000546820 SLC3A1Q07837 685 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 PRSS48Q7RTY5 328 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 OR10AD1Q8NGE0 317 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 OR14K1Q8NGZ2 314 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 ERGIC1Q969X5 290 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 RNF166Q96A37 237 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-213ENST00000546820 C10orf35Q96D05 121 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 OR2V2Q96R30 315 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 MICU1Q9BPX6 476 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 ADAT1Q9BUB4 502 aaKnown RBP11.69□□□□□ -0.54
PTCH1-213ENST00000546820 PLEKHA1Q9HB21 404 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 HHLA2Q9UM44 414 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 V9GYS6 101 aa11.69□□□□□ -0.54
PTCH1-213ENST00000546820 OR4C45A6NMZ5 311 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 ZNF850A8MQ14 1090 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 F5H5P2 479 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 OGG1O15527 345 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 MLNRO43193 412 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 NRASP01111 189 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 ACHEP22303 614 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 COL8A2P25067 703 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 ACKR3P25106 362 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 GTF2A1P52655 376 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-213ENST00000546820 GABARAPL2P60520 117 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 PRDX4Q13162 271 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 TNK1Q13470 666 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 CLVS2Q5SYC1 327 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 Q6ZSR3 168 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 KRT74Q7RTS7 529 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 RDH10Q8IZV5 341 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 ZNF525Q8N782 197 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 ITLN1Q8WWA0 313 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 CCL17Q92583 94 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 MEGF10Q96KG7 1140 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 Q96MF0 132 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 SOX7Q9BT81 388 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 CHODLQ9H9P2 273 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 PAK1IP1Q9NWT1 392 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-213ENST00000546820 PPP1R3CQ9UQK1 317 aa11.68□□□□□ -0.54
PTCH1-213ENST00000546820 LOC107986453A0A1B0GWG9 222 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 LRRC30A6NM36 301 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 CDC14BO60729 498 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 NCR1O76036 304 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 ZFPL1O95159 310 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 FAHP16930 419 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 CD200P41217 278 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 BDH1Q02338 343 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 CDK5R1Q15078 307 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 SPHARQ15513 63 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 SPNS3Q6ZMD2 512 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 MOB3CQ70IA8 216 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 PEG10Q86TG7 708 aaKnown RBP11.67□□□□□ -0.54
PTCH1-213ENST00000546820 ZDHHC23Q8IYP9 409 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 ZNF485Q8NCK3 441 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 RTL8AQ9BWD3 113 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 FN3KRPQ9HA64 309 aa11.67□□□□□ -0.54
PTCH1-213ENST00000546820 PRRC2AP48634 2157 aaKnown RBP11.67□□□□□ -0.54
PTCH1-213ENST00000546820 LYNX1G3V0Z9 82 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 H3BSH0 61 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 MT-ND2P03891 347 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 GRPP07492 148 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 LYNX1P0DP58 116 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 IRF2P14316 349 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 SLC25A16P16260 332 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 ZNF20P17024 532 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 GIFP27352 417 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 GATA4P43694 442 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 ACSM1Q08AH1 577 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 MAB21L1Q13394 359 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 IRF3Q14653 427 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 MED22Q15528 200 aa11.66□□□□□ -0.54
PTCH1-213ENST00000546820 CEACAM21Q3KPI0 293 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms