RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 TNFSF13O75888 250 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 TOX4O94842 621 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 CGAP01215 116 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 HLA-DQA2P01906 255 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 RAF1P04049 648 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 OR8G3PP0DMU2 310 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 GYPEP15421 78 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 ZNF182P17025 639 aaPredicted RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 RAB4AP20338 218 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 EDNRAP25101 427 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 MPGP29372 298 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 CEACAM8P31997 349 aaPredicted RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 KIR2DL3P43628 341 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 KIR3DL2P43630 455 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 RIDAP52758 137 aaKnown RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 GRB2P62993 217 aaKnown RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 ARF1P84077 181 aaKnown RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 SRYQ05066 204 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 ECH1Q13011 328 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 RAB35Q15286 201 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 ADIPOQQ15848 244 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 C3AR1Q16581 482 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 CEACAM16Q2WEN9 425 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 WDR38Q5JTN6 314 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 FBXW9Q5XUX1 488 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 RTL6Q6ICC9 239 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 Q6ZT83 130 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 SEM1Q6ZVN7 128 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 CHMP1BQ7LBR1 199 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 PRSS35Q8N3Z0 413 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 SLC22A24Q8N4F4 322 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 NUDT10Q8NFP7 164 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 NDNFQ8TB73 568 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 CAPSLQ8WWF8 208 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 HSD17B8Q92506 261 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 GHSRQ92847 366 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 APH1AQ96BI3 265 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 NUDT11Q96G61 164 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 FAM71F1Q96KD3 344 aaPredicted RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 ZNF75AQ96N20 296 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 DCLRE1CQ96SD1 692 aaKnown RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 MRPL37Q9BZE1 423 aaKnown RBP7.34□□□□□ -1.23
VPS29-203ENST00000546588 DCSTAMPQ9H295 470 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 ELOVL3Q9HB03 270 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 PALMDQ9NP74 551 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 TREM1Q9NP99 234 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 FAIMQ9NVQ4 179 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 SSR3Q9UNL2 185 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 FAM215AQ9Y5M1 114 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 TRBV5-7A0A0A0MS05 114 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 TRBV2A0A0J9YWF9 115 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 IQCMA0A1B0GVH7 501 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 MED19A0JLT2 244 aaPredicted RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 CCDC160A6NGH7 325 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 ZSCAN5BA6NJL1 495 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 DHRS7CA6NNS2 312 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 ZNF587BE7ETH6 402 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 PNPP00491 289 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 APOC1P02654 83 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 CSTBP04080 98 aaKnown RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 ITGA5P08648 1049 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 INHBBP09529 407 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 UBCP0CG48 685 aaKnown RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 STAG3L3P0CL85 134 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 CDAP32320 146 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 ETV6P41212 452 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 PCBD1P61457 104 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 KLRB1Q12918 225 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 RSPO1Q2MKA7 263 aaPredicted RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 ZNF829Q3KNS6 432 aaPredicted RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 ELFN2Q5R3F8 820 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 CARD17Q5XLA6 110 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 ZNF544Q6NX49 715 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 LRRN1Q6UXK5 716 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 NUFIP2Q7Z417 695 aaKnown RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 FAM90A1Q86YD7 464 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 CCDC36Q8IYA8 594 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 ELMOD2Q8IZ81 293 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 GABRG1Q8N1C3 465 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 C9orf106Q8NAJ2 232 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 CCDC54Q8NEL0 328 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 ZNF671Q8TAW3 534 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 THEM6Q8WUY1 208 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 NSMAFQ92636 917 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 SLC25A46Q96AG3 418 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 FBXO17Q96EF6 278 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 KCTD7Q96MP8 289 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 ATF6BQ99941 703 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 C11orf54Q9H0W9 315 aaPredicted RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 SLC25A18Q9H1K4 315 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 TP63Q9H3D4 680 aaPredicted RBP7.33□□□□□ -1.24
VPS29-203ENST00000546588 SLC17A5Q9NRA2 495 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 GSTK1Q9Y2Q3 226 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 GRIP1Q9Y3R0 1128 aa7.33□□□□□ -1.24
VPS29-203ENST00000546588 A0A0U1RQV5 110 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 SERTM2A0A1B0GWG4 89 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 hCG_1807616A0A1W2PRN6 198 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 PCP4L1A6NKN8 68 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 RER1O15258 196 aa7.32□□□□□ -1.24
VPS29-203ENST00000546588 MAGEB4O15481 346 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms