RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DPY19L4Q7Z388 723 aa10.33□□□□□ -0.76
SCAF11-208ENST00000546534 Q8N2B8 174 aa10.33□□□□□ -0.76
SCAF11-208ENST00000546534 PAPD5Q8NDF8 572 aaKnown RBP10.33□□□□□ -0.76
SCAF11-208ENST00000546534 OR8J3Q8NGG0 315 aa10.33□□□□□ -0.76
SCAF11-208ENST00000546534 OR9Q1Q8NGQ5 310 aa10.33□□□□□ -0.76
SCAF11-208ENST00000546534 OR8S1Q8NH09 359 aa10.33□□□□□ -0.76
SCAF11-208ENST00000546534 C12orf43Q96C57 262 aaKnown RBP10.33□□□□□ -0.76
SCAF11-208ENST00000546534 DUS3LQ96G46 650 aaKnown RBP10.33□□□□□ -0.76
SCAF11-208ENST00000546534 MAP6Q96JE9 813 aa10.33□□□□□ -0.76
SCAF11-208ENST00000546534 TMEM5Q9Y2B1 443 aa10.33□□□□□ -0.76
SCAF11-208ENST00000546534 A0A1W2PQ09 198 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 A0A1W2PRX2 142 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 ANGPTL7O43827 346 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 TFF1P04155 84 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 NAA10P41227 235 aaPredicted RBP10.32□□□□□ -0.76
SCAF11-208ENST00000546534 RPS6KA3P51812 740 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 GMFBP60983 142 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 BLMHQ13867 455 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 OR1M1Q8NGA1 313 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 SPTSSAQ969W0 71 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 RSRC1Q96IZ7 334 aaKnown RBP10.32□□□□□ -0.76
SCAF11-208ENST00000546534 NMNAT3Q96T66 252 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 DDOQ99489 341 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 SNTG1Q9NSN8 517 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 HAO2Q9NYQ3 351 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 ZNF391Q9UJN7 358 aa10.32□□□□□ -0.76
SCAF11-208ENST00000546534 H0YAE9 185 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 TROVE2P10155 538 aaKnown RBP eCLIP10.31□□□□□ -0.76
SCAF11-208ENST00000546534 POU1F1P28069 291 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 OTX1P32242 354 aaPredicted RBP10.31□□□□□ -0.76
SCAF11-208ENST00000546534 GSK3BP49841 420 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 DGUOKQ16854 277 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 ZNF788Q6ZQV5 615 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 OR5D13Q8NGL4 314 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 ERMAPQ96PL5 475 aaPredicted RBP10.31□□□□□ -0.76
SCAF11-208ENST00000546534 GAFA1Q96PS6 74 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 OR5M11Q96RB7 305 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 B9D2Q9BPU9 175 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 TMEM120AQ9BXJ8 343 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 WNT10AQ9GZT5 417 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 WDR13Q9H1Z4 485 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 ANKRD19PQ9H560 264 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 PPP1R3EQ9H7J1 279 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 RPRD1BQ9NQG5 326 aaKnown RBP10.31□□□□□ -0.76
SCAF11-208ENST00000546534 SLC25A10Q9UBX3 287 aaPredicted RBP10.31□□□□□ -0.76
SCAF11-208ENST00000546534 N6AMT1Q9Y5N5 214 aa10.31□□□□□ -0.76
SCAF11-208ENST00000546534 NKX6-3A6NJ46 265 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 ANKRD30BLA7E2S9 258 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 FAM220BPB1ANY3 271 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 CDIPTO14735 213 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 RENP00797 406 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 HLA-DQA2P01906 255 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 SLC2A1P11166 492 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 FAHP16930 419 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 NDUFB7P17568 137 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 DDOSTP39656 456 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 RPS27P42677 84 aaKnown RBP10.3□□□□□ -0.76
SCAF11-208ENST00000546534 OMPP47874 163 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 CAV3P56539 151 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 DRAM2Q6UX65 266 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 ZBTB46Q86UZ6 589 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 OR2T12Q8NG77 320 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 OR4K13Q8NH42 304 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 STON2Q8WXE9 905 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 MED30Q96HR3 178 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 CDCA4Q9BXL8 241 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 DNTTIP1Q9H147 329 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 FN3KQ9H479 309 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 ELL3Q9HB65 397 aaPredicted RBP10.3□□□□□ -0.76
SCAF11-208ENST00000546534 TMBIM4Q9HC24 238 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 MRPL22Q9NWU5 206 aaKnown RBP10.3□□□□□ -0.76
SCAF11-208ENST00000546534 RAB21Q9UL25 225 aa10.3□□□□□ -0.76
SCAF11-208ENST00000546534 UNC119BA6NIH7 251 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 SIGLEC5O15389 551 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 TIPRLO75663 272 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 ZNF682O95780 498 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 HIST1H1CP16403 213 aaKnown RBP10.29□□□□□ -0.76
SCAF11-208ENST00000546534 RAB13P51153 203 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 PRKXP51817 358 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 CD83Q01151 205 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 COL10A1Q03692 680 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 IFI44LQ53G44 452 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 SMARCD3Q6STE5 483 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 MKXQ8IYA7 352 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 SPSB4Q96A44 273 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 RAB3IPQ96QF0 476 aaPredicted RBP10.29□□□□□ -0.76
SCAF11-208ENST00000546534 NSRP1Q9H0G5 558 aaKnown RBP10.29□□□□□ -0.76
SCAF11-208ENST00000546534 TLNRD1Q9H1K6 362 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 OPA3Q9H6K4 179 aa10.29□□□□□ -0.76
SCAF11-208ENST00000546534 DNAH9Q9NYC9 4486 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 OR6C68A6NDL8 312 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 MRASO14807 208 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 ARPC3O15145 178 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 XRCC2O43543 280 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 PEX14O75381 377 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 NPPAP01160 153 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 ACAA1P09110 424 aaPredicted RBP10.28□□□□□ -0.76
SCAF11-208ENST00000546534 PF4V1P10720 104 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 PSKH1P11801 424 aa10.28□□□□□ -0.76
SCAF11-208ENST00000546534 HOXD3P31249 432 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms