RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PIGCQ92535 297 aa10.42□□□□□ -0.74
CCDC38-202ENST00000546386 PNPLA2Q96AD5 504 aa10.42□□□□□ -0.74
CCDC38-202ENST00000546386 CHIAQ9BZP6 476 aa10.42□□□□□ -0.74
CCDC38-202ENST00000546386 TINAGL1Q9GZM7 467 aaPredicted RBP10.42□□□□□ -0.74
CCDC38-202ENST00000546386 CHST6Q9GZX3 395 aa10.42□□□□□ -0.74
CCDC38-202ENST00000546386 CENPEQ02224 2701 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 RLN1P04808 185 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 RRADP55042 308 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 LSM6P62312 80 aaKnown RBP10.41□□□□□ -0.74
CCDC38-202ENST00000546386 MRPS34P82930 218 aaKnown RBP10.41□□□□□ -0.74
CCDC38-202ENST00000546386 ESPL1Q14674 2120 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 KISS1Q15726 138 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 PLA1AQ53H76 456 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 ANKRD16Q6P6B7 361 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 VWA1Q6PCB0 445 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 FAM219AQ8IW50 185 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 OR14K1Q8NGZ2 314 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 CPT1CQ8TCG5 803 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 ST6GAL2Q96JF0 529 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 SF3B5Q9BWJ5 86 aaKnown RBP10.41□□□□□ -0.74
CCDC38-202ENST00000546386 ZNF222Q9UK12 451 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 FZR1Q9UM11 496 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 MRPS28Q9Y2Q9 187 aaKnown RBP10.41□□□□□ -0.74
CCDC38-202ENST00000546386 A0A0A6YYD4 124 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 XRCC3O43542 346 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 SULT1B1O43704 296 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 YES1P07947 543 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 EDN3P14138 238 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 GABRR1P24046 479 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 RAD52P43351 418 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 ERVS71-1P61550 626 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 PITPNAQ00169 270 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 STK11Q15831 433 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 KCNJ8Q15842 424 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 Q6ZTK2 550 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 TMEM178AQ8NBL3 297 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 GIMAP1Q8WWP7 306 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 PHYHIPQ92561 330 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 EXTL1Q92935 676 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 DIABLOQ9NR28 239 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 CSMD2Q7Z408 3487 aa10.41□□□□□ -0.74
CCDC38-202ENST00000546386 IGKV1-27A0A075B6S5 117 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 ACOT7O00154 380 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 HSPB6O14558 160 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 FCN2Q15485 313 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 NKAPLQ5M9Q1 402 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 FAM166AQ6J272 317 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 TMED4Q7Z7H5 227 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 OR4C16Q8NGL9 310 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 SPTSSAQ969W0 71 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 HDHD3Q9BSH5 251 aaPredicted RBP10.4□□□□□ -0.74
CCDC38-202ENST00000546386 POFUT1Q9H488 388 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 NEK6Q9HC98 313 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 RALYQ9UKM9 306 aaKnown RBP10.4□□□□□ -0.74
CCDC38-202ENST00000546386 ACACBO00763 2458 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 MEX3AA1L020 520 aaKnown RBP10.4□□□□□ -0.74
CCDC38-202ENST00000546386 RBBP9O75884 186 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 TMEM225BP0DP42 221 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 DUSP1P28562 367 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 MTCP1P56278 107 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 GRB2P62993 217 aaKnown RBP10.4□□□□□ -0.74
CCDC38-202ENST00000546386 CDNFQ49AH0 187 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 PDSS1Q5T2R2 415 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 TNFAIP8L1Q8WVP5 186 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 SORCS2Q96PQ0 1159 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 RHBDD3Q9Y3P4 386 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 TIMM10BQ9Y5J6 103 aa10.4□□□□□ -0.74
CCDC38-202ENST00000546386 CENPXA8MT69 81 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 GABARAPH6UMI1 98 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 SIX6O95475 246 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 PRSS3P35030 304 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ST3GAL2Q16842 350 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 CRIP3Q6Q6R5 217 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF782Q6ZMW2 699 aaPredicted RBP10.39□□□□□ -0.75
CCDC38-202ENST00000546386 FGD2Q7Z6J4 655 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 OR6M1Q8NGM8 313 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 SEH1LQ96EE3 360 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 IP6K3Q96PC2 410 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 B3GNT2Q9NY97 397 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ARHGAP21Q5T5U3 1957 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 RAB27BO00194 218 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 IL18BPO95998 194 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 PI3P19957 117 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 KCNMB1Q16558 191 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 Q5BKY6 102 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 PLAC9Q5JTB6 97 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ADGRE4PQ86SQ3 457 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF584Q8IVC4 421 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ARHGAP5-AS1Q96IT6 56 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 MARVELD1Q9BSK0 173 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ST6GALNAC5Q9BVH7 336 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 C20orf85Q9H1P6 137 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 DPAGT1Q9H3H5 408 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 SLC17A5Q9NRA2 495 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 GPR160Q9UJ42 338 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF221Q9UK13 617 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 SHANK1Q9Y566 2161 aa10.39□□□□□ -0.75
CCDC38-202ENST00000546386 ZNF850A8MQ14 1090 aa10.38□□□□□ -0.75
CCDC38-202ENST00000546386 PYCARD-AS1I3L0S3 204 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms