RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 KLBQ86Z14 1044 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 FTMTQ8N4E7 242 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 SEMA6DQ8NFY4 1073 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 OR52N1Q8NH53 320 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 HAVCR2Q8TDQ0 301 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 MEGF10Q96KG7 1140 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 TPRKBQ9Y3C4 175 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 V9GYS6 101 aa17.35■□□□□ 0.37
HMGA2-211ENST00000545998 NDUFS8O00217 210 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 CDC14BO60729 498 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 MTRF1O75570 445 aaKnown RBP17.34■□□□□ 0.37
HMGA2-211ENST00000545998 RP2O75695 350 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 CST4P01036 141 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 CDK1P06493 297 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 UBCP0CG48 685 aaKnown RBP17.34■□□□□ 0.37
HMGA2-211ENST00000545998 ACHEP22303 614 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 CRHBPP24387 322 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 GIFP27352 417 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 TGM4P49221 684 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 GBX2P52951 348 aaPredicted RBP17.34■□□□□ 0.37
HMGA2-211ENST00000545998 MAB21L1Q13394 359 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 RIN1Q13671 783 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 ALKBH1Q13686 389 aaKnown RBP17.34■□□□□ 0.37
HMGA2-211ENST00000545998 DOK3Q7L591 496 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 ZNF485Q8NCK3 441 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 SGCDQ92629 289 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 DVL3Q92997 716 aaPredicted RBP17.34■□□□□ 0.37
HMGA2-211ENST00000545998 DUSP21Q9H596 190 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 PPP1R3EQ9H7J1 279 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 CHODLQ9H9P2 273 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 UBAP1Q9NZ09 502 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 CACNG2Q9Y698 323 aa17.34■□□□□ 0.37
HMGA2-211ENST00000545998 OR4C45A6NMZ5 311 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 TNFRSF1AP19438 455 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 CD200P41217 278 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 SRP9P49458 86 aaKnown RBP17.33■□□□□ 0.37
HMGA2-211ENST00000545998 RIPPLY1Q0D2K3 151 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 RNLSQ5VYX0 342 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 RDH10Q8IZV5 341 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 CELF2-AS1Q8N7Q2 184 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 OR14K1Q8NGZ2 314 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 MYDGFQ969H8 173 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 PAPOLGQ9BWT3 736 aaKnown RBP17.33■□□□□ 0.37
HMGA2-211ENST00000545998 DLL4Q9NR61 685 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 ZNF275Q9NSD4 429 aaPredicted RBP17.33■□□□□ 0.37
HMGA2-211ENST00000545998 PIGLQ9Y2B2 252 aa17.33■□□□□ 0.37
HMGA2-211ENST00000545998 ZNF816-ZNF321PA0A0X1KG74 233 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 A0A1B0GVI7 797 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 LOC107986453A0A1B0GWG9 222 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 DHRS7CA6NNS2 312 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 VWC2LB2RUY7 222 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 ISG15P05161 165 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 GNALP38405 381 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 GTF2A1P52655 376 aaPredicted RBP17.32■□□□□ 0.36
HMGA2-211ENST00000545998 RBM48Q5RL73 367 aaKnown RBP17.32■□□□□ 0.36
HMGA2-211ENST00000545998 ZBTB37Q5TC79 503 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 SPERTQ8NA61 448 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 GATAD2BQ8WXI9 593 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 PIMREGQ9BSJ6 248 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 GCM1Q9NP62 436 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 BABAM2Q9NXR7 383 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 MPC1Q9Y5U8 109 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 MED13LQ71F56 2210 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 ZNF850A8MQ14 1090 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 SYT7O43581 403 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 FAHP16930 419 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 PRDX4Q13162 271 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 TMEM244Q5VVB8 128 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 XAF1Q6GPH4 301 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 CCDC54Q8NEL0 328 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 PIGCQ92535 297 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 CDCA4Q9BXL8 241 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 TREM2Q9NZC2 230 aa17.32■□□□□ 0.36
HMGA2-211ENST00000545998 CR1P17927 2039 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.31■□□□□ 0.36
HMGA2-211ENST00000545998 IGHV3-64DA0A0J9YX35 117 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 LOC100289279A0A1B0GTE1 492 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 H3BSH0 61 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 PTBP3O95758 552 aaKnown RBP17.31■□□□□ 0.36
HMGA2-211ENST00000545998 LALBAP00709 142 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 SLC25A16P16260 332 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 GATA4P43694 442 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 HFEQ30201 348 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 CCDC58Q4VC31 144 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 NANOGP1Q8N7R0 232 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 RPS4Y2Q8TD47 263 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 CCL17Q92583 94 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 ITPKCQ96DU7 683 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 BPESC1Q9GZL8 116 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 ABCB9Q9NP78 766 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 ERVK-18Q9QC07 812 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 ENPP5Q9UJA9 477 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 PPP1R3CQ9UQK1 317 aa17.31■□□□□ 0.36
HMGA2-211ENST00000545998 A0A096LNT2 108 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 MYL12BO14950 172 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 ZFPL1O95159 310 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 NR4A2P43354 598 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 TMEM33P57088 247 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 HNRNPA0Q13151 305 aaKnown RBP17.3■□□□□ 0.36
HMGA2-211ENST00000545998 CDK5R1Q15078 307 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms