RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 C17orf67Q0P5P2 114 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 ECH1Q13011 328 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 SWI5Q1ZZU3 235 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 FAM76BQ5HYJ3 339 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 RTL6Q6ICC9 239 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 OPN5Q6U736 354 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 RTN4RL2Q86UN3 420 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 C17orf82Q86X59 251 aaPredicted RBP7.74□□□□□ -1.17
TDP1-204ENST00000545686 WDFY1Q8IWB7 410 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 OR51F2Q8NH61 342 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.74□□□□□ -1.17
TDP1-204ENST00000545686 ARHGAP5-AS1Q96IT6 56 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 C5orf34Q96MH7 638 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 MRPL13Q9BYD1 178 aaKnown RBP7.74□□□□□ -1.17
TDP1-204ENST00000545686 OR2S2Q9NQN1 319 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 SLC22A11Q9NSA0 550 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 C1orf123Q9NWV4 160 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 MED29Q9NX70 200 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 RPH3AQ9Y2J0 694 aaPredicted RBP7.74□□□□□ -1.17
TDP1-204ENST00000545686 PCDHGA1Q9Y5H4 931 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 LHFPL6Q9Y693 200 aa7.74□□□□□ -1.17
TDP1-204ENST00000545686 MYO7BQ6PIF6 2116 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 A0A1W2PPC4 97 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 LIPT2A6NK58 231 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 FOXI3A8MTJ6 420 aaPredicted RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 NME1P15531 152 aaKnown RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 NFYBP25208 207 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 BIDP55957 195 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 ARFRP1Q13795 201 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 HABP2Q14520 560 aaPredicted RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 RPL7L1Q6DKI1 246 aaKnown RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 FAM109BQ6ICB4 259 aaPredicted RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 DOK3Q7L591 496 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 ABHD12BQ7Z5M8 362 aaPredicted RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 BHLHE23Q8NDY6 225 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 NOXO1Q8NFA2 376 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 OR8B12Q8NGG6 310 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 OR2AJ1Q8NGZ0 328 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 ARL5BQ96KC2 179 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 SULT4A1Q9BR01 284 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 CNTNAP3Q9BZ76 1288 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 SLC7A5P2Q9GIP4 190 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 OR10A2Q9H208 303 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 ZNF304Q9HCX3 659 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 SERINC1Q9NRX5 453 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 TUBD1Q9UJT1 453 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 C14orf166Q9Y224 244 aaKnown RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 TIMM10BQ9Y5J6 103 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 KNL1Q8NG31 2342 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 VSTM2BA6NLU5 285 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 SERPINE3A8MV23 424 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 C1orf196B1AJZ1 125 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 UBE2CO00762 179 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 ZNF354AO60765 605 aaPredicted RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 EIF3GO75821 320 aaKnown RBP eCLIP7.73□□□□□ -1.17
TDP1-204ENST00000545686 IFNA2P01563 188 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 HCKP08631 526 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 GIMD1P0DJR0 217 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 PMELP40967 661 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 S100A10P60903 97 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 FAM3AP98173 230 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 SMCO1Q147U7 214 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 PNLDC1Q8NA58 520 aaKnown RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 CPNE2Q96FN4 548 aaPredicted RBP7.73□□□□□ -1.17
TDP1-204ENST00000545686 KIRREL1Q96J84 757 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 TCEAL7Q9BRU2 100 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 TUBA4BQ9H853 241 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 GPR84Q9NQS5 396 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 EHFQ9NZC4 300 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 POLR1DQ9Y2S0 133 aa7.73□□□□□ -1.17
TDP1-204ENST00000545686 PMS2P1A4D2B8 440 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 K7EPK0 472 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 RRP8O43159 456 aaKnown RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 CRTAPO75718 401 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 IGHG1P01857 330 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 PRF1P14222 555 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 ZNF708P17019 499 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 NME2P22392 152 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 RPL12P30050 165 aaKnown RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 RBMXP38159 391 aaKnown RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 PTGFRP43088 359 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 PPM1FP49593 454 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 SNU13P55769 128 aaKnown RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 CSNK2A1P68400 391 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 HYAL1Q12794 435 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 KCNMB1Q16558 191 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 SLC25A53Q5H9E4 307 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 FBXO46Q6PJ61 603 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 DHRS11Q6UWP2 260 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 COMMD2Q86X83 199 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 LURAP1LQ8IV03 231 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 FAM71E2Q8N5Q1 922 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 UBAC2Q8NBM4 344 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 PLPP5Q8NEB5 264 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 CSNK2A3Q8NEV1 391 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 C2CD4CQ8TF44 421 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 VN1R1Q9GZP7 353 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 BANF2Q9H503 90 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms