RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 H1FXQ92522 213 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 SEH1LQ96EE3 360 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 IL1RAPQ9NPH3 570 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 MEPEQ9NQ76 525 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 HIF3AQ9Y2N7 669 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 ENPP4Q9Y6X5 453 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 OR6C6A6NF89 314 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 FABP3P05413 133 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 RAP2AP10114 183 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 ATP6V1B2P21281 511 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 CA6P23280 308 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 CHATP28329 748 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 RBM34P42696 430 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 GUCA1AP43080 201 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 OR1E2P47887 323 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 NPTX1Q15818 432 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 KHDC1LQ5JSQ8 128 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 COLCA1Q6ZS62 124 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 HDDC2Q7Z4H3 204 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 CENPVQ7Z7K6 275 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 RBM45Q8IUH3 476 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 OFCC1Q8IZS5 231 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 DYNAPQ8N1N2 210 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 OR5L1Q8NGL2 311 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 RBP7Q96R05 134 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 CITED4Q96RK1 184 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 FNDC11Q9BVV2 318 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 METTL8Q9H825 291 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 SF3B6Q9Y3B4 125 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 ALMS1Q8TCU4 4167 aa12.35□□□□□ -0.43
CLSTN3-216ENST00000545663 DHRS12A0PJE2 317 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 A6NDX4 124 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 KRT36O76013 467 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 IGF2P01344 180 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 TFF1P04155 84 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 GRPP07492 148 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 FUT1P19526 365 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 AMY2BP19961 511 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 IL5RAQ01344 420 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 SCRN3Q0VDG4 424 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 TRAM2Q15035 370 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 OR8G1Q15617 311 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 CCDC92Q53HC0 331 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 OR1F12Q8NHA8 337 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 RSRC1Q96IZ7 334 aaKnown RBP12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 KRCC1Q9NPI7 259 aaPredicted RBP12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 RIMS3Q9UJD0 308 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 SLC7A7Q9UM01 511 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 TCF19Q9Y242 345 aa12.34□□□□□ -0.43
CLSTN3-216ENST00000545663 HECTD4Q9Y4D8 3996 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 TCRBV5S2A0A599 114 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 TCRBV3S1A0A5B6 114 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 NKX6-3A6NJ46 265 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 RAMP3O60896 148 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 MAGEA2P43356 314 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 RRM2BQ7LG56 351 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 ZDHHC21Q8IVQ6 265 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 RNF113BQ8IZP6 322 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 LINC00471Q8N535 108 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 OR4D11Q8NGI4 311 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 APOBEC3DQ96AK3 386 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 C7orf34Q96L11 122 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 DMRTB1Q96MA1 342 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 ZNF649Q9BS31 505 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 MCRIP2Q9BUT9 160 aaKnown RBP12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 TXNIPQ9H3M7 391 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 VSX1Q9NZR4 365 aaPredicted RBP12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 NDUFAF4Q9P032 175 aa12.33□□□□□ -0.44
CLSTN3-216ENST00000545663 hCG_1807616A0A1W2PRN6 198 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 A0A1W2PRQ8 180 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 H7C1C5 153 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 NDUFB3O43676 98 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 PTBP3O95758 552 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 SEMG1P04279 462 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 H1F0P07305 194 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 FCGR1AP12314 374 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 IFNGR2P38484 337 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 LCN6P62502 163 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 ECH1Q13011 328 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 PIN1Q13526 163 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 DGCR6Q14129 220 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 GK2Q14410 553 aaPredicted RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 ZFP1Q6P2D0 407 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 LHFPL4Q7Z7J7 247 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 OR5T2Q8NGG2 359 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 PFN4Q8NHR9 129 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 DUS3LQ96G46 650 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 LYZL4Q96KX0 146 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 ZNF426Q9BUY5 554 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 ALG12Q9BV10 488 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 HCAR1Q9BXC0 346 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 STX18Q9P2W9 335 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 ZMAT5Q9UDW3 170 aaKnown RBP12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 A4GNTQ9UNA3 340 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 AURKCQ9UQB9 309 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 V9GYQ6 96 aa12.32□□□□□ -0.44
CLSTN3-216ENST00000545663 M0R1W7 72 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms