RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TERB2Q8NHR7 220 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 FAM117AQ9C073 453 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 SLC6A15Q9H2J7 730 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 SLCO5A1Q9H2Y9 848 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 EHFQ9NZC4 300 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 OR2F2O95006 317 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 SERPINA5P05154 406 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 NFYBP25208 207 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 RPL35P42766 123 aaKnown RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 AIMP2Q13155 320 aaKnown RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 OR2F1Q13607 317 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 PLPPR5Q32ZL2 321 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 PLXDC2Q6UX71 529 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 THRSPQ92748 146 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 ZNF385AQ96PM9 386 aaKnown RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 TLNRD1Q9H1K6 362 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 ZNF726A6NNF4 738 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 ZNF878C9JN71 531 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 BCAT2O15382 392 aaPredicted RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 NUDT21O43809 227 aaKnown RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 IGHMP01871 453 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 PGA4P0DJD7 388 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 PGA3P0DJD8 388 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 OPRM1P35372 400 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 SNU13P55769 128 aaKnown RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 SP6Q3SY56 376 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 C5orf24Q7Z6I8 188 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 PGAM5Q96HS1 289 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 C1orf147Q96MC9 270 aaPredicted RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 ARPC5LQ9BPX5 153 aa13.26□□□□□ -0.29
USP28-214ENST00000545540 MRPL13Q9BYD1 178 aaKnown RBP13.26□□□□□ -0.29
USP28-214ENST00000545540 TMEM14DPA8MWL7 114 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 TRAF3IP2O43734 574 aaPredicted RBP13.25□□□□□ -0.29
USP28-214ENST00000545540 SCGB1D2O95969 90 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 IGHG1P01857 330 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 PDSS1Q5T2R2 415 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 FAM122CQ6P4D5 195 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 ETV3LQ6ZN32 361 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 C2CD4CQ8TF44 421 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 MYOTQ9UBF9 498 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 CCDC85CA6NKD9 419 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 F8W036 122 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 FCGR2AP12318 317 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 HIST1H1DP16402 221 aaKnown RBP13.25□□□□□ -0.29
USP28-214ENST00000545540 NAT1P18440 290 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 NME2P22392 152 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
USP28-214ENST00000545540 BLOC1S1P78537 153 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 OR5H2Q8NGV7 314 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 OR13G1Q8NGZ3 307 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 ST8SIA1Q92185 356 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 MAP1BP46821 2468 aaKnown RBP13.25□□□□□ -0.29
USP28-214ENST00000545540 DUS4LO95620 317 aaKnown RBP13.25□□□□□ -0.29
USP28-214ENST00000545540 BPNT1O95861 308 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 CFPP27918 469 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 SSBP1Q04837 148 aaKnown RBP13.25□□□□□ -0.29
USP28-214ENST00000545540 PCK2Q16822 640 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 PHF19Q5T6S3 580 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 TSPO2Q5TGU0 170 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 NUBPLQ8TB37 319 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 B3GALT5Q9Y2C3 310 aa13.25□□□□□ -0.29
USP28-214ENST00000545540 CFAP47Q6ZTR5 3102 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 SLC33A1O00400 549 aaPredicted RBP13.24□□□□□ -0.29
USP28-214ENST00000545540 SPRY1O43609 319 aaPredicted RBP13.24□□□□□ -0.29
USP28-214ENST00000545540 OR2A2Q6IF42 318 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 NOXO1Q8NFA2 376 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 LYZL4Q96KX0 146 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 UCK1Q9HA47 277 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 MED9Q9NWA0 146 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 OCIAD1Q9NX40 245 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 ALKBH4Q9NXW9 302 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 PTGDSP41222 190 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 CCL7P80098 99 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 KISS1Q15726 138 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 UBE2V2Q15819 145 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 HOGA1Q86XE5 327 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 LDLRAD3Q86YD5 345 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 WDSUB1Q8N9V3 476 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 PLPP5Q8NEB5 264 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 TOMM40LQ969M1 308 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 PIK3IP1Q96FE7 263 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 DEFB126Q9BYW3 111 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 HPF1Q9NWY4 346 aa13.24□□□□□ -0.29
USP28-214ENST00000545540 MELTFP08582 738 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 PRKACAP17612 351 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 RTBDNQ9BSG5 229 aaPredicted RBP13.23□□□□□ -0.29
USP28-214ENST00000545540 ZNF160Q9HCG1 818 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 PCDHB16Q9NRJ7 776 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 WIF1Q9Y5W5 379 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 RAB6AP20340 208 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 NOVA1P51513 510 aaKnown RBP13.23□□□□□ -0.29
USP28-214ENST00000545540 ACY1Q03154 408 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 RBM39Q14498 530 aaKnown RBP13.23□□□□□ -0.29
USP28-214ENST00000545540 THEM4Q5T1C6 240 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 RPL7L1Q6DKI1 246 aaKnown RBP13.23□□□□□ -0.29
USP28-214ENST00000545540 RASL10BQ96S79 203 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 GPR173Q9NS66 373 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 IL2RAP01589 272 aa13.23□□□□□ -0.29
USP28-214ENST00000545540 SRFP11831 508 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms