RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 IGHV3-15A0A0B4J1V0 119 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 J3QRE1 110 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 ANKRD34CP0C6C1 535 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 KIR3DL2P43630 455 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 DSCR4P56555 118 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 EFNB1P98172 346 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 ETFDHQ16134 617 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 LBHQ53QV2 105 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 PLXDC2Q6UX71 529 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 CLEC9AQ6UXN8 241 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 NHLRC1Q6VVB1 395 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 MEX3BQ6ZN04 569 aaKnown RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 RHOUQ7L0Q8 258 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 ZNF775Q96BV0 537 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 NKX3-1Q99801 234 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 PAPOLGQ9BWT3 736 aaKnown RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 RAB33BQ9H082 229 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 PIKFYVEQ9Y2I7 2098 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 UMAD1C9J7I0 102 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 LYPD3O95274 346 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 HLXQ14774 488 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 C1QL3Q5VWW1 255 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 GUSBP11Q6P575 273 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 HSD17B13Q7Z5P4 300 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 ARHGEF39Q8N4T4 335 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 OR4S1Q8NGB4 309 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 OR10G3Q8NGC4 313 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 OR51A2Q8NGJ7 313 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 NUBPLQ8TB37 319 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 ATOH1Q92858 354 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 REEP6Q96HR9 211 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 UHRF2Q96PU4 802 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 TRAF4Q9BUZ4 470 aaPredicted RBP5.17□□□□□ -1.58
VPS50-220ENST00000544910 FBXO4Q9UKT5 387 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 FLVCR1Q9Y5Y0 555 aa5.17□□□□□ -1.58
VPS50-220ENST00000544910 IGKV1D-42A0A075B6H8 117 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 TRAV8-7A0A075B6U6 113 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 C4orf47A7E2U8 309 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 C17orf112F2Z3M2 114 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 TOX4O94842 621 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ITGB2P05107 769 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 AGFG1P52594 562 aaKnown RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 GAS1P54826 345 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 F2RL1P55085 397 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 LPAL2Q16609 132 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 RHBDD2Q6NTF9 364 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 INTS12Q96CB8 462 aaKnown RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 CNTD2Q9H8S5 307 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 KCNIP1Q9NZI2 227 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 GHRLQ9UBU3 117 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 V9GYS6 101 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 MDFIC2A0A1B0GVS7 189 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 A0A1W2PPV4 95 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 SHISA3A0PJX4 238 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 HMSDA8MTL9 139 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 TRAPPC2LH3BP13 241 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 RAC2P15153 192 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 CTRB1P17538 263 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 RPS4XP62701 263 aaKnown RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 HBG1P69891 147 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 HBG2P69892 147 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 SCGB2A2Q13296 93 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 MOGAT2Q3SYC2 334 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 CTRB2Q6GPI1 263 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 C11orf87Q6NUJ2 197 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 PET117Q6UWS5 81 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 C6orf15Q6UXA7 325 aaPredicted RBP5.16□□□□□ -1.58
VPS50-220ENST00000544910 UNQ9370/PRO34162Q6UXP9 181 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 LINC00114Q6XXX2 140 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 FAM185AQ8N0U4 392 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 FAM58AQ8N1B3 248 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 STPG2Q8N412 459 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 KLHDC1Q8N7A1 406 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 SPACA5Q96QH8 159 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 LANCL2Q9NS86 450 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 WNT16Q9UBV4 365 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 FAM96BQ9Y3D0 163 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 LINC00862A6NCI5 91 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 LIPT2A6NK58 231 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 M0R135 149 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 CDC14BO60729 498 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 DBHP09172 617 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ECH1Q13011 328 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 DBX2Q6ZNG2 339 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 LRRTM1Q86UE6 522 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 OR51A4Q8NGJ6 313 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 OR1J1Q8NGS3 322 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 MCHR2Q969V1 340 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ADIPOR1Q96A54 375 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ZNF799Q96GE5 643 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ANKRD10Q9NXR5 420 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 PISDQ9UG56 409 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 TIMM10BQ9Y5J6 103 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 MYOFQ9NZM1 2061 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 A0A0U1RQK1 487 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ZNF814B7Z6K7 855 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 TSPAN2O60636 221 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 ABOP16442 354 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 RAB5AP20339 215 aa5.16□□□□□ -1.58
VPS50-220ENST00000544910 EPHA1P21709 976 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms