RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SEMA6DQ8NFY4 1073 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 OR1J1Q8NGS3 322 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 RGP1Q92546 391 aaPredicted RBP8.2□□□□□ -1.1
YBX3-215ENST00000544504 RPL3LQ92901 407 aaKnown RBP8.2□□□□□ -1.1
YBX3-215ENST00000544504 CPNE2Q96FN4 548 aaPredicted RBP8.2□□□□□ -1.1
YBX3-215ENST00000544504 FAM71F1Q96KD3 344 aaPredicted RBP8.2□□□□□ -1.1
YBX3-215ENST00000544504 C18orf12Q96KH6 178 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 WFIKKN1Q96NZ8 548 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 OR14A2Q96R54 314 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 SMR3AQ99954 134 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 NAA50Q9GZZ1 169 aaKnown RBP8.2□□□□□ -1.1
YBX3-215ENST00000544504 ABCB9Q9NP78 766 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 FOXJ3Q9UPW0 622 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 NOP16Q9Y3C1 178 aaKnown RBP8.2□□□□□ -1.1
YBX3-215ENST00000544504 V9GYS6 101 aa8.2□□□□□ -1.1
YBX3-215ENST00000544504 hCG_38984A0A1B0GV85 526 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 GGT3PA6NGU5 568 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 ALX3O95076 343 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 THBDP07204 575 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 OCMP0CE72 109 aaPredicted RBP8.19□□□□□ -1.1
YBX3-215ENST00000544504 SRMP19623 302 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 NR4A1P22736 598 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 CALRP27797 417 aaKnown RBP8.19□□□□□ -1.1
YBX3-215ENST00000544504 GCH1P30793 250 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 GLRXP35754 106 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 WNT5AP41221 380 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 SOX2P48431 317 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 SERPINB10P48595 397 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 GSK3AP49840 483 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 NCS1P62166 190 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 LSM3P62310 102 aaKnown RBP8.19□□□□□ -1.1
YBX3-215ENST00000544504 FAM3AP98173 230 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 OR8B8Q15620 311 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 MOGQ16653 247 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 CLEC9AQ6UXN8 241 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 RFPL4BQ6ZWI9 263 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 UTS2BQ765I0 119 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 NKAIN3Q8N8D7 197 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 NUP37Q8NFH4 326 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 OR13C5Q8NGS8 318 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 OR14K1Q8NGZ2 314 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 FAM222BQ8WU58 562 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 PIGTQ969N2 578 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 PPP1R14AQ96A00 147 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 ZC3HAV1LQ96H79 300 aaKnown RBP8.19□□□□□ -1.1
YBX3-215ENST00000544504 CENPOQ9BU64 300 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 DCSTAMPQ9H295 470 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 NOX4Q9NPH5 578 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 PTTG3PQ9NZH4 202 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 NPAP1Q9NZP6 1156 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 ZNF319Q9P2F9 582 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 STARD10Q9Y365 291 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 MXRA5Q9NR99 2828 aa8.19□□□□□ -1.1
YBX3-215ENST00000544504 ZNF816-ZNF321PA0A0X1KG74 233 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 TRIM64BA6NI03 449 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 ANKRD30BLA7E2S9 258 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 MAGEB3O15480 346 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 CTAG2O75638 210 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 NGFP01138 241 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 HEXAP06865 529 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 CD3EP07766 207 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 INHBBP09529 407 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 FAM157BP0CG42 384 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 RAB3AP20336 220 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 RAB3BP20337 219 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 PRKACBP22694 351 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 CAPZA1P52907 286 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 ZNF92Q03936 586 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 SNTB2Q13425 540 aaKnown RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 GK2Q14410 553 aaPredicted RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 CNN3Q15417 329 aaKnown RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 DGUOKQ16854 277 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 CLVS2Q5SYC1 327 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 FOXB2Q5VYV0 432 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 RGS7BPQ6MZT1 257 aaPredicted RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 SLC22A25Q6T423 547 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 MYPOPQ86VE0 399 aaPredicted RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 CDH26Q8IXH8 852 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 ZNF101Q8IZC7 436 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 PAQR4Q8N4S7 273 aaPredicted RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 OR51A4Q8NGJ6 313 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 OR10AC1Q8NH08 325 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 OR2AE1Q8NHA4 323 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 AP3S1Q92572 193 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 FGGYQ96C11 551 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 FOXRED1Q96CU9 486 aaPredicted RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 HAVCR1Q96D42 359 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 MBD6Q96DN6 1003 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 LYZL4Q96KX0 146 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 MRI1Q9BV20 369 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 CHST5Q9GZS9 411 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 SLC22A4Q9H015 551 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 ZCCHC4Q9H5U6 513 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 TMEM138Q9NPI0 162 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 CGGBP1Q9UFW8 167 aaPredicted RBP8.18□□□□□ -1.1
YBX3-215ENST00000544504 GPR160Q9UJ42 338 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 PIGLQ9Y2B2 252 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 MPC1Q9Y5U8 109 aa8.18□□□□□ -1.1
YBX3-215ENST00000544504 ABCA4P78363 2273 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms