RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 DHODHQ02127 395 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 ZNF169Q14929 603 aaPredicted RBP12.52□□□□□ -0.4
VPS33A-209ENST00000544349 DCAF12L2Q5VW00 463 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 RTN4RL2Q86UN3 420 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 MCEMP1Q8IX19 187 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 GABRG1Q8N1C3 465 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 MUC20Q8N307 709 aaPredicted RBP12.52□□□□□ -0.4
VPS33A-209ENST00000544349 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 ELMOD3Q96FG2 381 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 MED30Q96HR3 178 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 GPN1Q9HCN4 374 aaPredicted RBP12.52□□□□□ -0.4
VPS33A-209ENST00000544349 SLC7A10Q9NS82 523 aa12.52□□□□□ -0.4
VPS33A-209ENST00000544349 PLSCR5A0PG75 271 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 OR6C65A6NJZ3 312 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 OR2A4O95047 310 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 IGHV3-9P01782 118 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 GABRA1P14867 456 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 B4GALT1P15291 398 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 STEAP1BQ6NZ63 245 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 SLC22A24Q8N4F4 322 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 ACBD4Q8NC06 268 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 OR2A7Q96R45 310 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 TINAGL1Q9GZM7 467 aaPredicted RBP12.52□□□□□ -0.41
VPS33A-209ENST00000544349 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 PLEK2Q9NYT0 353 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 TAS2R8Q9NYW2 309 aa12.52□□□□□ -0.41
VPS33A-209ENST00000544349 LOC390937A0A1W2PQ73 354 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 LINC00862A6NCI5 91 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 RPL36A-HNRNPH2H7BZ11 118 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 WISP2O76076 250 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 SLC2A1P11166 492 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 ZNF35P13682 527 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 PMPCAQ10713 525 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 TOR2AQ5JU69 321 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 RNF144BQ7Z419 303 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 OR8B12Q8NGG6 310 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 CMBLQ96DG6 245 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
VPS33A-209ENST00000544349 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 ZNF175Q9Y473 711 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 AUP1Q9Y679 476 aa12.51□□□□□ -0.41
VPS33A-209ENST00000544349 A0A1B0GTI1 187 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 TMEM235A6NFC5 223 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 SLC22A20A6NK97 555 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 M0R233 179 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 AQP7O14520 342 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 GOSR2O14653 212 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 SYT7O43581 403 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 LPLP06858 475 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 OTX1P32242 354 aaPredicted RBP12.5□□□□□ -0.41
VPS33A-209ENST00000544349 STK11Q15831 433 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
VPS33A-209ENST00000544349 C1orf100Q5SVJ3 147 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 FGGYQ96C11 551 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 SOX7Q9BT81 388 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 OPN4Q9UHM6 478 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 F5H5K5 113 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 SGCEO43556 437 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 PDGFAP04085 211 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 ZNF32P17041 273 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 RAP2BP61225 183 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 SCRN3Q0VDG4 424 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 IKZF1Q13422 519 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 UNC119Q13432 240 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 OPCMLQ14982 345 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 RAB35Q15286 201 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 ESCO2Q56NI9 601 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 Q6ZS92 163 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 FAM57BQ71RH2 274 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 NUFIP2Q7Z417 695 aaKnown RBP12.5□□□□□ -0.41
VPS33A-209ENST00000544349 NAA40Q86UY6 237 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 UXS1Q8NBZ7 420 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 OR52N4Q8NGI2 321 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 OR1J2Q8NGS2 313 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 OR51E1Q8TCB6 317 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 CYYR1Q96J86 154 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 CLEC4MQ9H2X3 399 aaPredicted RBP12.5□□□□□ -0.41
VPS33A-209ENST00000544349 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 FREM1Q5H8C1 2179 aa12.5□□□□□ -0.41
VPS33A-209ENST00000544349 SYNGR3O43761 229 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 ACTBP60709 375 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 ACTG1P63261 375 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 SLC16A14Q7RTX9 510 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 SKA3Q8IX90 412 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 SPACA3Q8IXA5 215 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 OR2AK2Q8NG84 335 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 RADILQ96JH8 1075 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 POFUT1Q9H488 388 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 GP6Q9HCN6 339 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 UBQLN2Q9UHD9 624 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 TIMM10BQ9Y5J6 103 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 ASPMQ8IZT6 3477 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 ZFHX4Q86UP3 3567 aa12.49□□□□□ -0.41
VPS33A-209ENST00000544349 ZNF587BE7ETH6 402 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms