RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 A6NL46 340 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 KLRC4-KLRK1H3BQV0 150 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 M0QYG6 137 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 RAB3DO95716 219 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 ACTL6AO96019 429 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 HCKP08631 526 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 UBBP0CG47 229 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 CPN1P15169 458 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 CD46P15529 392 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 PCBD1P61457 104 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 KISS1Q15726 138 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
LDB3-207ENST00000542786 TUSC5Q8IXB3 177 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 FAM109AQ8N4B1 249 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 ASCC1Q8N9N2 400 aaKnown RBP12.35□□□□□ -0.43
LDB3-207ENST00000542786 PRSS33Q8NF86 280 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 OR11H4Q8NGC9 324 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 OR2AE1Q8NHA4 323 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 HYLS1Q96M11 299 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 PIPOXQ9P0Z9 390 aa12.35□□□□□ -0.43
LDB3-207ENST00000542786 EP300Q09472 2414 aaPredicted RBP12.35□□□□□ -0.43
LDB3-207ENST00000542786 OR14I1A6ND48 311 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 NKX2-8O15522 239 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 AKR7A2O43488 359 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 SSNA1O43805 119 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 MRPL33O75394 65 aaKnown RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 SYNGR4O95473 234 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 CHRM2P08172 466 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 GSTT2P0CG29 244 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 PTGFRP43088 359 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 HTR5AP47898 357 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 TMEM50BP56557 158 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ARF1P84077 181 aaKnown RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 C3AR1Q16581 482 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 DMRTC1Q5HYR2 192 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 TMEM42Q69YG0 159 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 OR8S1Q8NH09 359 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 NUDCD2Q8WVJ2 157 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 REEP6Q96HR9 211 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 SELENOIQ9C0D9 397 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ZNF436Q9C0F3 470 aaPredicted RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 ZDHHC11Q9H8X9 412 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 SPRR3Q9UBC9 169 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ATPIF1Q9UII2 106 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ZNF222Q9UK12 451 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 PRR33A8MZF0 331 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 MFNGO00587 321 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 SOCS1O15524 211 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 MTRF1O75570 445 aaKnown RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 MPIG6BO95866 241 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 IGHV3-9P01782 118 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 GNB3P16520 340 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 RRADP55042 308 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 FOXG1P55316 489 aaPredicted RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 RPS27AP62979 156 aaKnown RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 SLC22A6Q4U2R8 563 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ZNF766Q5HY98 468 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 COLCA1Q6ZS62 124 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 NLRC3Q7RTR2 1065 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 TRAPPC6BQ86SZ2 158 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ZNF101Q8IZC7 436 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 CPEB3Q8NE35 698 aaKnown RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 SLC6A7Q99884 636 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 ALX4Q9H161 411 aaPredicted RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 BANF2Q9H503 90 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 SLA2Q9H6Q3 261 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 MYOZ1Q9NP98 299 aaPredicted RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 CA10Q9NS85 328 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 PARPBPQ9NWS1 579 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 SLC2A8Q9NY64 477 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 GHRLQ9UBU3 117 aa12.34□□□□□ -0.43
LDB3-207ENST00000542786 MCTS1Q9ULC4 181 aaKnown RBP12.34□□□□□ -0.43
LDB3-207ENST00000542786 FREM2Q5SZK8 3169 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 ZNF407Q9C0G0 2248 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 hCG_38984A0A1B0GV85 526 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 RAD51DO75771 328 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 CYB5AP00167 134 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 GSTP1P09211 210 aaKnown RBP12.33□□□□□ -0.44
LDB3-207ENST00000542786 LIPCP11150 499 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 HIST1H1DP16402 221 aaKnown RBP12.33□□□□□ -0.44
LDB3-207ENST00000542786 NAT1P18440 290 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 ZNF584Q8IVC4 421 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 ZNF100Q8IYN0 542 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 GVQW1Q8N7I0 195 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 CHST4Q8NCG5 386 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 SEMA6DQ8NFY4 1073 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 OR4S1Q8NGB4 309 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 OR52B4Q8NGK2 314 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 OR13C8Q8NGS7 320 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 NPRL2Q8WTW4 380 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 WDYHV1Q96HA8 205 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 CHST6Q9GZX3 395 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 IRF2BPLQ9H1B7 796 aa12.33□□□□□ -0.44
LDB3-207ENST00000542786 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.33□□□□□ -0.44
LDB3-207ENST00000542786 SCP2D1Q9UJQ7 156 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms