RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PGAM5Q96HS1 289 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 PHB2Q99623 299 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 NICN1Q9BSH3 213 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 SOX7Q9BT81 388 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 SF3B5Q9BWJ5 86 aaKnown RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 CST11Q9H112 138 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 FOXD3Q9UJU5 478 aaPredicted RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 DKKL1Q9UK85 242 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 FBXO4Q9UKT5 387 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 NSG1A0A0A6YYJ2 146 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 IGKV1-9A0A0C4DH69 117 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 MFSD2BA6NFX1 497 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 NPIPA2E9PIF3 369 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 NPIPA3F8WFD2 350 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 DHHO43323 396 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 GDF9O60383 454 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 ZIC3O60481 467 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 CBR3O75828 277 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 DHRS3O75911 302 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR2F2O95006 317 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 DUS4LO95620 317 aaKnown RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 MPIG6BO95866 241 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 IFNA6P05013 189 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 ZP3P21754 424 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 ANOS1P23352 680 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 FOLR3P41439 243 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 BAMBIQ13145 260 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR2F1Q13607 317 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 PLAC9Q5JTB6 97 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF660Q6AZW8 331 aaPredicted RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 C17orf107Q6ZR85 190 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 RPS19BP1Q86WX3 136 aaKnown RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 KCNRGQ8N5I3 272 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 PNLDC1Q8NA58 520 aaKnown RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM104Q8NE00 496 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR4K15Q8NH41 348 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 MAFAQ8NHW3 353 aaPredicted RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 PCNPQ8WW12 178 aaKnown RBP5.76□□□□□ -1.49
PTPRO-208ENST00000542557 PP6455Q8WZ26 134 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 FBXW5Q969U6 566 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OCSTAMPQ9BR26 566 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 PIGQQ9BRB3 760 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 REG4Q9BYZ8 158 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 RDH8Q9NYR8 311 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 COMMD9Q9P000 198 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 TNFSF18Q9UNG2 199 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 KIAA1549Q9HCM3 1950 aa5.76□□□□□ -1.49
PTPRO-208ENST00000542557 OR2AT4A6NND4 320 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 DHRS7CA6NNS2 312 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 FOXI3A8MTJ6 420 aaPredicted RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 B8ZZF3 427 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 CA11O75493 328 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 CSN2P05814 226 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 CCL4P13236 92 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM50BP56557 158 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ARL6IP1Q15041 203 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 SGCAQ16586 387 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 SLC22A6Q4U2R8 563 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 PHYHD1Q5SRE7 291 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 C11orf87Q6NUJ2 197 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 RNF144BQ7Z419 303 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF546Q86UE3 836 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 LURAP1LQ8IV03 231 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 MAML2Q8IZL2 1156 aaPredicted RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 TMEM156Q8N614 296 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 OR5M9Q8NGP3 310 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZC3H10Q96K80 434 aaKnown RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 LYZL4Q96KX0 146 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 GNRHR2Q96P88 292 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF385AQ96PM9 386 aaKnown RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 SPACA5Q96QH8 159 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 CDX2Q99626 313 aaPredicted RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 CHST5Q9GZS9 411 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF160Q9HCG1 818 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 SDHAF2Q9NX18 166 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF224Q9NZL3 707 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 DBX1A6NMT0 343 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 SOCS1O15524 211 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 EFSO43281 561 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 GP1BAP07359 652 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF250P15622 560 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 POU3F2P20265 443 aaPredicted RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 SRD5A2P31213 254 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF84P51523 738 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 IL13RA1P78552 427 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 MRPS34P82930 218 aaKnown RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 CHAF1BQ13112 559 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 KISS1Q15726 138 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 MICBQ29980 383 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZNF528Q3MIS6 628 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 NSUN5P2Q63ZY6 315 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 RTL6Q6ICC9 239 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 CRIP3Q6Q6R5 217 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ALKAL2Q6UX46 152 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 SLC16A14Q7RTX9 510 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 C20orf196Q8IYI0 205 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 EIF4E3Q8N5X7 224 aaKnown RBP5.75□□□□□ -1.49
PTPRO-208ENST00000542557 ZIC4Q8N9L1 334 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 OR2I1PQ8NGU4 316 aa5.75□□□□□ -1.49
PTPRO-208ENST00000542557 KCNE4Q8WWG9 221 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms