RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 MBOAT2Q6ZWT7 520 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 NRMQ8IXM6 262 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 OR52N4Q8NGI2 321 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 OR10R2Q8NGX6 335 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 OR8S1Q8NH09 359 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 C16orf52Q8NHV5 167 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 MVB12AQ96EY5 273 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 SAMD8Q96LT4 415 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 CLCC1Q96S66 551 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 NAA11Q9BSU3 229 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 CHST6Q9GZX3 395 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 DNAJC4Q9NNZ3 241 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 RCC2Q9P258 522 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC13A4Q9UKG4 626 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC7A7Q9UM01 511 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 GON4LQ3T8J9 2241 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 SPEGQ15772 3267 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 KNL1Q8NG31 2342 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 TMEM272A0A1B0GTI8 110 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 COLCA2A8K830 154 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 EIF4E2O60573 245 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 BRI3O95415 125 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 SPARCP09486 303 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 CCNOP22674 350 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 CD82P27701 267 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR1D4P47884 311 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 ARRB1P49407 418 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 PNLIPRP2P54317 469 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR2B8PP59922 312 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 MRPS10P82664 201 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 CBFBQ13951 182 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR7A5Q15622 319 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF141Q15928 474 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 PGGHGQ32M88 737 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR52W1Q6IF63 320 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 WDFY1Q8IWB7 410 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF295-AS1Q8N0V1 137 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR5M8Q8NGP6 311 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR11L1Q8NGX0 322 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR4C6Q8NH72 309 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 PPP1R35Q8TAP8 253 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OSTF1Q92882 214 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 MESP1Q9BRJ9 268 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 EGLN1Q9GZT9 426 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 CCDC187A0A096LP49 1063 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A0D9SG52 128 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 TRBV11-1A0A0K0K1C0 115 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 AGPAT2O15120 278 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 ABOP16442 354 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 CPT2P23786 658 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 DLSTP36957 453 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 P2RX1P51575 399 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 RPL19P84098 196 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF616Q08AN1 781 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 OR1Q1Q15612 314 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 TP53I3Q53FA7 332 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 GUSBP11Q6P575 273 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 DPY19L2P2Q6ZN68 376 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 PIGXQ8TBF5 258 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 SYNPRQ8TBG9 265 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 FAM222BQ8WU58 562 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 TSLPQ969D9 159 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 ARSGQ96EG1 525 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 S100A16Q96FQ6 103 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 URM1Q9BTM9 101 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 G6PC3Q9BUM1 346 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 HCAR1Q9BXC0 346 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 SLITRK2Q9H156 845 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 GAR1Q9NY12 217 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 FLRT3Q9NZU0 649 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 COMMD9Q9P000 198 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 HIF3AQ9Y2N7 669 aa7.12□□□□□ -1.27
PDLIM5-221ENST00000542407 TRAV14DV4A0A0A6YYC5 116 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A1W2PQM1 296 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ANKRD20A5PA0PJZ0 165 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 TRAPPC13A5PLN9 417 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CDC42EP2O14613 210 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CTDSPLO15194 276 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 GLCEO94923 617 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 IGKV3-11P04433 115 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 GYPBP06028 91 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CCL2P13500 99 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 BMP7P18075 431 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 GRNP28799 593 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CD96P40200 585 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF41P51814 821 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC37A1P57057 533 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 KLF3P57682 345 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 FXYD6P3P58550 94 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ARF6P62330 175 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 RPS15P62841 145 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CSRP2Q16527 193 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 HLA-BQ31612 363 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 COX15Q7KZN9 410 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 BCORP1Q8N888 145 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CYB561A3Q8NBI2 242 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 OR2T33Q8NG76 320 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 OR4D6Q8NGJ1 314 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms