RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 LRRC20Q8TCA0 184 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 TMEM54Q969K7 222 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 ASB9Q96DX5 294 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 C19orf60Q96EN9 201 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 CCDC42Q96M95 316 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 MBOAT7Q96N66 472 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 MICU1Q9BPX6 476 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 GAL3ST2Q9H3Q3 398 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 FBXO44Q9H4M3 255 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 CLMPQ9H6B4 373 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF702PQ9H963 129 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 MRM3Q9HC36 420 aaKnown RBP3.11□□□□□ -1.91
SNHG1-217ENST00000541578 VCX3AQ9NNX9 186 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 C8orf4Q9NR00 106 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 TUBG2Q9NRH3 451 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 MCUBQ9NWR8 336 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 HMGXB4Q9UGU5 601 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 UBIAD1Q9Y5Z9 338 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 PTPRBP23467 1997 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 AKAP13Q12802 2813 aa3.11□□□□□ -1.91
SNHG1-217ENST00000541578 KIF26AQ9ULI4 1882 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 LOC100506127A0A0U1RQW1 187 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 LOC100653049A0A140TA62 436 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 A0A1B0GUH1 482 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 A0A1B0GW55 424 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF879B4DU55 563 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 GOLGA8MH3BSY2 632 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 PLPP1O14494 284 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 XKRYO14609 159 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 HDAC3O15379 428 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 XRCC2O43543 280 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CDC40O60508 579 aaKnown RBP eCLIP3.1□□□□□ -1.915e-11■□□□□ 11.3
SNHG1-217ENST00000541578 PFDN1O60925 122 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 SRSF10O75494 262 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CLDN11O75508 207 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 MMP23AO75900 390 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 KRT34O76011 436 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 AIFM1O95831 613 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 HLA-DRAP01903 254 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 HBE1P02100 147 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 APOA1P02647 267 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 HSPB1P04792 205 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ARG1P05089 322 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 SERPINE2P07093 398 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CLTAP09496 248 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4L2P0CJ85 424 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4L3P0CJ86 424 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4L4P0CJ87 422 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4L5P0CJ88 424 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4L6P0CJ89 424 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4L7P0CJ90 424 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CCNE1P24864 410 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ALDH3A1P30838 453 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 RGRP47804 291 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 HSPA13P48723 471 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 UBE2MP61081 183 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 VBP1P61758 197 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 NUTF2P61970 127 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 MRPS25P82663 173 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 EGFEM1PQ0D2K5 195 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ITGB3BPQ13352 177 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 AQP6Q13520 282 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 KCTD19Q17RG1 926 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF774Q6NX45 483 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4L9Q6RFH8 374 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 C6orf89Q6UWU4 347 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 PAMR1Q6UXH9 720 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 H2AFVQ71UI9 128 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 HDDC2Q7Z4H3 204 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 THOC6Q86W42 341 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 APRG1Q8IVJ8 170 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 FAM58AQ8N1B3 248 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ARHGAP18Q8N392 663 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 PNKDQ8N490 385 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ASCC1Q8N9N2 400 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 NKAPP1Q8N9T2 125 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 HSD17B11Q8NBQ5 300 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 OR52E5Q8NH55 327 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CDC26Q8NHZ8 85 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 RAB1CQ92928 201 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 NAT6Q93015 286 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CIDECQ96AQ7 238 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF707Q96C28 371 aaPredicted RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 FCRL1Q96LA6 429 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 FOXN4Q96NZ1 517 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CIB1Q99828 191 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 MRPL37Q9BZE1 423 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 RPF2Q9H7B2 306 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 NTN4Q9HB63 628 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 EML4Q9HC35 981 aaKnown RBP3.1□□□□□ -1.91
SNHG1-217ENST00000541578 AGPAT3Q9NRZ7 376 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 ADA2Q9NZK5 511 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 DUX4Q9UBX2 424 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 C15orf41Q9Y2V0 281 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 CDH10Q9Y6N8 788 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 PLXNB3Q9ULL4 1909 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 TRIP11Q15643 1979 aa3.1□□□□□ -1.91
SNHG1-217ENST00000541578 MYO18BQ8IUG5 2567 aa3.09□□□□□ -1.91
SNHG1-217ENST00000541578 KALRNO60229 2985 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms