RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MT-ATP6P00846 226 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 SERPINA2P20848 420 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 NOVA1P51513 510 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 P2RY4P51582 365 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 GPR85P60893 370 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 HABP2Q14520 560 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM128Q5BJH2 165 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 AADACL3Q5VUY0 350 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 C20orf196Q8IYI0 205 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 STOML3Q8TAV4 291 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 REEP6Q96HR9 211 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 NECAB3Q96P71 396 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 SPSB2Q99619 263 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 FANCFQ9NPI8 374 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 CLEC1BQ9P126 229 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 RCL1Q9Y2P8 373 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 LSM5Q9Y4Y9 91 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 FAM221AA4D161 298 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 A6NLC8 198 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR5K4A6NMS3 321 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 TMEM14DPA8MWL7 114 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 RNASEK-C17orf49H0YIS7 233 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 SLC33A1O00400 549 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 SNAPC5O75971 98 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 ISG15P05161 165 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 HIST1H1DP16402 221 aaKnown RBP9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 HLA-GP17693 338 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 CPT2P23786 658 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 HSD11B1P28845 292 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 SFTPDP35247 375 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 CSNK2A1P68400 391 aaPredicted RBP9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 DCDP81605 110 aaKnown RBP9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 ACY1Q03154 408 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 CFHR1Q03591 330 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 C14orf28Q4W4Y0 310 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 AVPI1Q5T686 147 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 KLHL24Q6TFL4 600 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 UQCC3Q6UW78 93 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 NUP54Q7Z3B4 507 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 CSNK2A3Q8NEV1 391 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 TMEM59Q9BXS4 323 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 MMP26Q9NRE1 261 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 GPR132Q9UNW8 380 aa9.15□□□□□ -0.95
CDC42SE1-207ENST00000540998 hCG_1809904A0A1W2PP81 198 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 A0A1W2PR64 198 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 A0A1W2PRV1 198 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 TTLL8A6PVC2 850 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 XRCC2O43543 280 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SNRNP70P08621 437 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 PTGER4P35408 488 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SNU13P55769 128 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 PDCD1Q15116 288 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 TOMM20Q15388 145 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SHHQ15465 462 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 PHF19Q5T6S3 580 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 NKAIN3Q8N8D7 197 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR5H2Q8NGV7 314 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 LILRB1Q8NHL6 650 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 PHOSPHO2Q8TCD6 241 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 PIGTQ969N2 578 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 ERGIC1Q969X5 290 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 CCNL2Q96S94 520 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SLC5A7Q9GZV3 580 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 TAF9BQ9HBM6 251 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 CARHSP1Q9Y2V2 147 aaKnown RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 COLCA2A8K830 154 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SNAPINO95295 136 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SFT2D2O95562 160 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 RAB6AP20340 208 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 RRADP55042 308 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 Q6ZRG5 221 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 C6orf201Q7Z4U5 140 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 C5orf24Q7Z6I8 188 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR5D14Q8NGL3 314 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 RPS10P5Q9NQ39 176 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 BIN3Q9NQY0 253 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 COPS7AQ9UBW8 275 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 HS3ST3A1Q9Y663 406 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 HSPB2A8KAH6 182 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 ATXN7O15265 892 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 DIRAS3O95661 229 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 BPNT1O95861 308 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 ARG1P05089 322 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 ZNF806P0C7X5 589 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 CD37P11049 281 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR3A2P47893 321 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 MMP16P51512 607 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 PEA15Q15121 130 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 HSPB2Q16082 182 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 KIAA0895LQ68EN5 471 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 H1FNTQ75WM6 255 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 OR51T1Q8NGJ9 327 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SULT4A1Q9BR01 284 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 NMES1Q9C002 83 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SLC26A1Q9H2B4 701 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 IFT22Q9H7X7 185 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 SERINC1Q9NRX5 453 aa9.14□□□□□ -0.95
CDC42SE1-207ENST00000540998 B3GAT1Q9P2W7 334 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms