RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 MICU1Q9BPX6 476 aa12.31□□□□□ -0.44
DDX11-217ENST00000540935 PAPOLGQ9BWT3 736 aaKnown RBP12.31□□□□□ -0.44
DDX11-217ENST00000540935 PRRG3Q9BZD7 231 aa12.31□□□□□ -0.44
DDX11-217ENST00000540935 BRD7Q9NPI1 651 aa12.31□□□□□ -0.44
DDX11-217ENST00000540935 FAM53CQ9NYF3 392 aa12.31□□□□□ -0.44
DDX11-217ENST00000540935 KAAG1Q9UBP8 84 aa12.31□□□□□ -0.44
DDX11-217ENST00000540935 CTSZQ9UBR2 303 aa12.31□□□□□ -0.44
DDX11-217ENST00000540935 C22orf46C9J442 243 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 ECDO95905 644 aaPredicted RBP12.3□□□□□ -0.44
DDX11-217ENST00000540935 RNASE1P07998 156 aaKnown RBP12.3□□□□□ -0.44
DDX11-217ENST00000540935 CFHR2P36980 270 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 PSMA6P60900 246 aaKnown RBP12.3□□□□□ -0.44
DDX11-217ENST00000540935 FGF12P61328 243 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 SNAPC1Q16533 368 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 MICBQ29980 383 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 GFOD2Q3B7J2 385 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 AWAT1Q58HT5 328 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 GPR157Q5UAW9 335 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 LCN1P1Q5VSP4 162 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 KCTD18Q6PI47 426 aaPredicted RBP12.3□□□□□ -0.44
DDX11-217ENST00000540935 DEGS2Q6QHC5 323 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 KRT77Q7Z794 578 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 FAM90A1Q86YD7 464 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 GALNT4Q8N4A0 578 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 C12orf43Q96C57 262 aaKnown RBP12.3□□□□□ -0.44
DDX11-217ENST00000540935 ZNF48Q96MX3 618 aaPredicted RBP12.3□□□□□ -0.44
DDX11-217ENST00000540935 RTL8AQ9BWD3 113 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 YIPF3Q9GZM5 350 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
DDX11-217ENST00000540935 ZNF319Q9P2F9 582 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 LAMP5Q9UJQ1 280 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 RHBDD3Q9Y3P4 386 aa12.3□□□□□ -0.44
DDX11-217ENST00000540935 ACOD1A6NK06 481 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 TMEM210A6NLX4 147 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 ZNF879B4DU55 563 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 P2RY10O00398 339 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 TMPRSS2O15393 492 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 CST4P01036 141 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 GYPAP02724 150 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 ALOX5APP20292 161 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 SLC2A5P22732 501 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 RASSF2P50749 326 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 CRISP1P54107 249 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 ESRRGP62508 458 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 SLC36A1Q7Z2H8 476 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 WDR86Q86TI4 376 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 C11orf53Q8IXP5 236 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 SGMS2Q8NHU3 365 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 LRRC29Q8WV35 223 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 ITPKCQ96DU7 683 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 TLNRD1Q9H1K6 362 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 TMEM14AQ9Y6G1 99 aa12.29□□□□□ -0.44
DDX11-217ENST00000540935 IGHV3OR16-10A0A075B7F0 116 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 DVL1O14640 695 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 GPR37O15354 613 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 GSC2O15499 205 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 TOX4O94842 621 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 DCTDP32321 178 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 HOXA4Q00056 320 aaPredicted RBP12.28□□□□□ -0.44
DDX11-217ENST00000540935 APOFQ13790 326 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 METTL11BQ5VVY1 283 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 TMEM236Q5W0B7 351 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 FAHD1Q6P587 224 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 BBS1Q8NFJ9 593 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 OR10Z1Q8NGY1 313 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 OR5K1Q8NHB7 308 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 ASB17Q8WXJ9 295 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 DMRTB1Q96MA1 342 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 C1orf147Q96MC9 270 aaPredicted RBP12.28□□□□□ -0.44
DDX11-217ENST00000540935 WDFY2Q96P53 400 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 DUX5Q96PT3 197 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 TEAD3Q99594 435 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 MROQ9BYG7 248 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 PRDM13Q9H4Q3 707 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 SMURF1Q9HCE7 757 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 TVP23BQ9NYZ1 205 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
DDX11-217ENST00000540935 A0A0U1RQV5 110 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 SRRM5B3KS81 715 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 CDIPTO14735 213 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 ZNF254O75437 659 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 EGR1P18146 543 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 CSNK2BP67870 215 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 BNIP1Q12981 228 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 PRDX4Q13162 271 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 PDCD1Q15116 288 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 PTGES3Q15185 160 aaKnown RBP12.27□□□□□ -0.45
DDX11-217ENST00000540935 BTN2A1Q7KYR7 527 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 OR8B12Q8NGG6 310 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 OR5P3Q8WZ94 311 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 ZDHHC16Q969W1 377 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 UTP4Q969X6 686 aaKnown RBP12.27□□□□□ -0.45
DDX11-217ENST00000540935 HIST1H2AAQ96QV6 131 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 PKP2Q99959 881 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 CADM1Q9BY67 442 aaKnown RBP12.27□□□□□ -0.45
DDX11-217ENST00000540935 DNTTIP1Q9H147 329 aa12.27□□□□□ -0.45
DDX11-217ENST00000540935 NOX4Q9NPH5 578 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms