RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.65□□□□□ -0.55
SNHG1-213ENST00000540725 TIPRLO75663 272 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 IFNGP01579 166 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 OCLNQ16625 522 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 CDONQ4KMG0 1287 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 WDR82Q6UXN9 313 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 FAM57BQ71RH2 274 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 VMO1Q7Z5L0 202 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.55
SNHG1-213ENST00000540725 OR6N2Q8NGY6 317 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 RNF133Q8WVZ7 376 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 CCT8L2Q96SF2 557 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 ABHD6Q9BV23 337 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 DGCR6LQ9BY27 220 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 CNTD2Q9H8S5 307 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 SP140LQ9H930 580 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 MED20Q9H944 212 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 CMC2Q9NRP2 79 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 DNAJC27Q9NZQ0 273 aa11.65□□□□□ -0.55
SNHG1-213ENST00000540725 A0A1B0GVI7 797 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 TCRBV5S2A0A599 114 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 APOC1P02654 83 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 ZNF3P17036 446 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 CFL1P23528 166 aaKnown RBP11.64□□□□□ -0.55
SNHG1-213ENST00000540725 GNALP38405 381 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 NAA10P41227 235 aaPredicted RBP11.64□□□□□ -0.55
SNHG1-213ENST00000540725 IER3P46695 156 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 GSK3AP49840 483 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 ZNF121P58317 390 aaPredicted RBP11.64□□□□□ -0.55
SNHG1-213ENST00000540725 MICAQ29983 383 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 GFOD2Q3B7J2 385 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 KLHL12Q53G59 568 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 PRSS45Q7RTY3 260 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 SLC36A1Q7Z2H8 476 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 FAM216BQ8N7L0 139 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 LY6G5BQ8NDX9 201 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 OR52H1Q8NGJ2 320 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 SEH1LQ96EE3 360 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 INTS14Q96SY0 518 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 PAPOLGQ9BWT3 736 aaKnown RBP11.64□□□□□ -0.55
SNHG1-213ENST00000540725 MAGIXQ9H6Y5 334 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 PPP1R3EQ9H7J1 279 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 REEP1Q9H902 201 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 BRD7Q9NPI1 651 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 ARL2BPQ9Y2Y0 163 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 SAMHD1Q9Y3Z3 626 aaKnown RBP11.64□□□□□ -0.55
SNHG1-213ENST00000540725 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 U3KQV3 271 aa11.64□□□□□ -0.55
SNHG1-213ENST00000540725 FAM183AA6NL82 134 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 M0QZ24 198 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 ACOT8O14734 319 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 TIMM23O14925 209 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 GSTT1P30711 240 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 KRTAP10-3P60369 221 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 OR2T5Q6IEZ7 315 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 RHOUQ7L0Q8 258 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 CSNK2A3Q8NEV1 391 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 OR2T29Q8NH02 315 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
SNHG1-213ENST00000540725 PGAM5Q96HS1 289 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 AMELYQ99218 206 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 MICU1Q9BPX6 476 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 TLNRD1Q9H1K6 362 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 OR10A2Q9H208 303 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 DPAGT1Q9H3H5 408 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 ZNF319Q9P2F9 582 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 FAM96BQ9Y3D0 163 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 RHBDD3Q9Y3P4 386 aa11.63□□□□□ -0.55
SNHG1-213ENST00000540725 ANXA2P2A6NMY6 339 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 CDIPTO14735 213 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 NDUFB3O43676 98 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 DCTN3O75935 186 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 AMY2BP19961 511 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 OPRL1P41146 370 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 IL5RAQ01344 420 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 IKZF1Q13422 519 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 STUMQ69YW2 141 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 LCN8Q6JVE9 175 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 METAP1DQ6UB28 335 aaPredicted RBP11.62□□□□□ -0.55
SNHG1-213ENST00000540725 SHFQ7M4L6 423 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 CMTM4Q8IZR5 234 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 GALNT4Q8N4A0 578 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 FTMTQ8N4E7 242 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 IQCF1Q8N6M8 205 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 TEX47Q8TBZ9 253 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 LRTOMTQ8WZ04 291 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 OTULINQ96BN8 352 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 ITPKCQ96DU7 683 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 DMRTB1Q96MA1 342 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 SEMA6AQ9H2E6 1030 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 MMP27Q9H306 513 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 RGCCQ9H4X1 137 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 SIRT7Q9NRC8 400 aa11.62□□□□□ -0.55
SNHG1-213ENST00000540725 PRPF19Q9UMS4 504 aaKnown RBP11.62□□□□□ -0.55
SNHG1-213ENST00000540725 GPR37O15354 613 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 CLPXO76031 633 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 GLCEO94923 617 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms