RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MAGEB1P43366 347 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 CCR9P51686 369 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 SNRPD2P62316 118 aaKnown RBP14.19□□□□□ -0.14
UBC-208ENST00000540700 SPARTQ8N0X7 666 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 OR51A4Q8NGJ6 313 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 OR14K1Q8NGZ2 314 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 DVL3Q92997 716 aaPredicted RBP14.19□□□□□ -0.14
UBC-208ENST00000540700 SORCS2Q96PQ0 1159 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 MND1Q9BWT6 205 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 FGF23Q9GZV9 251 aaPredicted RBP14.19□□□□□ -0.14
UBC-208ENST00000540700 CXorf56Q9H5V9 222 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 YAE1D1Q9NRH1 226 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 ERGIC3Q9Y282 383 aa14.19□□□□□ -0.14
UBC-208ENST00000540700 PNMA8CA0A1B0GUJ8 204 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 LOC107986453A0A1B0GWG9 222 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 A0A1B0GWJ7 208 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 GGT3PA6NGU5 568 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 A6NIN4 97 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 M0R233 179 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 NCR1O76036 304 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 LY6HO94772 140 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 IGHV1-46P01743 117 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 PPOXP50336 477 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 CHN2P52757 468 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 EMX1Q04741 257 aaPredicted RBP14.18□□□□□ -0.14
UBC-208ENST00000540700 NKPD1Q17RQ9 610 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 KCTD21Q4G0X4 260 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 DMKNQ6E0U4 476 aaPredicted RBP14.18□□□□□ -0.14
UBC-208ENST00000540700 OR8G5Q8NG78 346 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 PGLYRP3Q96LB9 341 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 SLC30A2Q9BRI3 323 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 RGCCQ9H4X1 137 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 OPA3Q9H6K4 179 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 ACOT13Q9NPJ3 140 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 ZNF701Q9NV72 531 aaPredicted RBP14.18□□□□□ -0.14
UBC-208ENST00000540700 RHBDD3Q9Y3P4 386 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 V9GYS6 101 aa14.18□□□□□ -0.14
UBC-208ENST00000540700 VSTM5A8MXK1 200 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 H7C417 338 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 SPRY3O43610 288 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 HLA-DPB1P04440 258 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 MRPL28Q13084 256 aaKnown RBP14.17□□□□□ -0.14
UBC-208ENST00000540700 TBCEQ15813 527 aaPredicted RBP14.17□□□□□ -0.14
UBC-208ENST00000540700 CLEC12BQ2HXU8 276 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 RPL22L1Q6P5R6 122 aaKnown RBP14.17□□□□□ -0.14
UBC-208ENST00000540700 ZNF773Q6PK81 442 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 OR10AD1Q8NGE0 317 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 OR13C5Q8NGS8 318 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 OPALINQ96PE5 141 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 DYNLRB1Q9NP97 96 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 ARFGEF3Q5TH69 2177 aa14.17□□□□□ -0.14
UBC-208ENST00000540700 TRBV2A0A0J9YWF9 115 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 LOC390937A0A1W2PQ73 354 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 C17orf100A8MU93 164 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 PHF1O43189 567 aaPredicted RBP14.16□□□□□ -0.14
UBC-208ENST00000540700 DHRS3O75911 302 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 IGHV4-39P01824 125 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 ISG15P05161 165 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 UBCP0CG48 685 aaKnown RBP14.16□□□□□ -0.14
UBC-208ENST00000540700 PAX1P15863 534 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 SELEP16581 610 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 FAHP16930 419 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 CA6P23280 308 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 ZNF81P51508 661 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 SELENOVP59797 346 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 RPS11P62280 158 aaKnown RBP eCLIP14.16□□□□□ -0.14
UBC-208ENST00000540700 SLC3A1Q07837 685 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 ACSM1Q08AH1 577 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 SPHARQ15513 63 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 MED22Q15528 200 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 CCDC58Q4VC31 144 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 DMRTC1Q5HYR2 192 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 DOK3Q7L591 496 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 KRT74Q7RTS7 529 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 COMMD2Q86X83 199 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 SMIM19Q96E16 107 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 MYCBPQ99417 103 aaPredicted RBP14.16□□□□□ -0.14
UBC-208ENST00000540700 VRK1Q99986 396 aaPredicted RBP14.16□□□□□ -0.14
UBC-208ENST00000540700 ZNF696Q9H7X3 374 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 TRIM36Q9NQ86 728 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 GPR160Q9UJ42 338 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 ZNF391Q9UJN7 358 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 ANK2Q01484 3957 aa14.16□□□□□ -0.14
UBC-208ENST00000540700 SYT7O43581 403 aa14.15□□□□□ -0.14
UBC-208ENST00000540700 MRPS14O60783 128 aaKnown RBP14.15□□□□□ -0.14
UBC-208ENST00000540700 ACHEP22303 614 aa14.15□□□□□ -0.14
UBC-208ENST00000540700 CFL1P23528 166 aaKnown RBP14.15□□□□□ -0.14
UBC-208ENST00000540700 TSTQ16762 297 aaKnown RBP14.15□□□□□ -0.14
UBC-208ENST00000540700 ZNF676Q8N7Q3 588 aa14.15□□□□□ -0.14
UBC-208ENST00000540700 SEMA6DQ8NFY4 1073 aa14.15□□□□□ -0.14
UBC-208ENST00000540700 UBASH3BQ8TF42 649 aa14.15□□□□□ -0.14
UBC-208ENST00000540700 ADAT3Q96EY9 351 aaPredicted RBP14.15□□□□□ -0.14
UBC-208ENST00000540700 REG4Q9BYZ8 158 aa14.15□□□□□ -0.14
UBC-208ENST00000540700 MRPL15Q9P015 296 aaKnown RBP14.15□□□□□ -0.14
UBC-208ENST00000540700 PIGLQ9Y2B2 252 aa14.15□□□□□ -0.14
UBC-208ENST00000540700 A0A1B0GVI7 797 aa14.14□□□□□ -0.15
UBC-208ENST00000540700 TMEM212A6NML5 194 aa14.14□□□□□ -0.15
UBC-208ENST00000540700 HPXP02790 462 aa14.14□□□□□ -0.15
UBC-208ENST00000540700 SMIM18P0DKX4 95 aa14.14□□□□□ -0.15
UBC-208ENST00000540700 CELP19835 753 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms