RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 LRP12Q9Y561 859 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 MPC1Q9Y5U8 109 aa9.65□□□□□ -0.86
RTN3-209ENST00000538995 A0A0U1RQV5 110 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 KIR2DS1A0A191URI9 304 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 hCG_1807616A0A1W2PRN6 198 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 TRIM77I1YAP6 450 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 ENSAO43768 121 aaKnown RBP9.64□□□□□ -0.87
RTN3-209ENST00000538995 CST4P01036 141 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 LHBP01229 141 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 GRPP07492 148 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 CFHR2P36980 270 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 EFNB1P98172 346 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 ZNF829Q3KNS6 432 aaPredicted RBP9.64□□□□□ -0.87
RTN3-209ENST00000538995 AADACL4Q5VUY2 407 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 TEX36Q5VZQ5 186 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 WDR25Q64LD2 544 aaPredicted RBP9.64□□□□□ -0.87
RTN3-209ENST00000538995 ZNF841Q6ZN19 808 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 KRT74Q7RTS7 529 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 GID4Q8IVV7 300 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 ZNF679Q8IYX0 411 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 GALNT4Q8N4A0 578 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 GCSAMQ8N6F7 178 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 OR1M1Q8NGA1 313 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 OR8B12Q8NGG6 310 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 TMEM163Q8TC26 289 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 FAM216AQ8WUB2 273 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 UPRTQ96BW1 309 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 ITPKCQ96DU7 683 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 CENPNQ96H22 339 aaPredicted RBP9.64□□□□□ -0.87
RTN3-209ENST00000538995 SLC6A7Q99884 636 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 MICU1Q9BPX6 476 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 RTL8AQ9BWD3 113 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 BRD7Q9NPI1 651 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 FAM206AQ9NX38 181 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 HAO2Q9NYQ3 351 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 ERVK-18Q9QC07 812 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 RHBDD3Q9Y3P4 386 aa9.64□□□□□ -0.87
RTN3-209ENST00000538995 TMEM210A6NLX4 147 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 C3orf80F5H4A9 247 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 TNFRSF13BO14836 293 aaPredicted RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 MITFO75030 526 aaPredicted RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 ATP6V1B1P15313 513 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 MUC1P15941 1255 aaPredicted RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 ACKR3P25106 362 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 CD80P33681 288 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 CD276Q5ZPR3 534 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 LYPD2Q6UXB3 125 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 C9orf139Q6ZV77 190 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 ASRGL1Q7L266 308 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 MEPCEQ7L2J0 689 aaKnown RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 AMIGO2Q86SJ2 522 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 WDR86Q86TI4 376 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 LRTOMTQ8WZ04 291 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 C12orf43Q96C57 262 aaKnown RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 LYZL4Q96KX0 146 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 OR8B4Q96RC9 309 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 CIB1Q99828 191 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 NUDT16L1Q9BRJ7 211 aaKnown RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 GABARAPL3Q9BY60 117 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 MOB1AQ9H8S9 216 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 ZMAT3Q9HA38 289 aaKnown RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 H2AFY2Q9P0M6 372 aaPredicted RBP9.63□□□□□ -0.87
RTN3-209ENST00000538995 KAAG1Q9UBP8 84 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 CTSZQ9UBR2 303 aa9.63□□□□□ -0.87
RTN3-209ENST00000538995 ZNF816-ZNF321PA0A0X1KG74 233 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 TMEM269A0A1B0GVZ9 245 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 ADAM20O43506 726 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 LIPFP07098 398 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 MRPL3P09001 348 aaKnown RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 EPHA2P29317 976 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 RIDAP52758 137 aaKnown RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 ACTR3P61158 418 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 POU4F2Q12837 409 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 PRDX4Q13162 271 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 MICBQ29980 383 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 KLF17Q5JT82 389 aaPredicted RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 ZBTB37Q5TC79 503 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 SFRP4Q6FHJ7 346 aaPredicted RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 WDR82Q6UXN9 313 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 RBMS3Q6XE24 437 aaKnown RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 ZNF826PQ6ZT77 177 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 DOK3Q7L591 496 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 FAM90A1Q86YD7 464 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 C11orf53Q8IXP5 236 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 ZDHHC23Q8IYP9 409 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 TCEANCQ8N8B7 351 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 BOLLQ8N9W6 283 aaKnown RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 C19orf18Q8NEA5 215 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 OR10Z1Q8NGY1 313 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 FAM81AQ8TBF8 368 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 LRRC29Q8WV35 223 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 OR5P3Q8WZ94 311 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 TECTBQ96PL2 329 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 RBM4BQ9BQ04 359 aaKnown RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 ADGRL4Q9HBW9 690 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 CLN6Q9NWW5 311 aa9.62□□□□□ -0.87
RTN3-209ENST00000538995 WARS2Q9UGM6 360 aaKnown RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 NUFIP1Q9UHK0 495 aaKnown RBP9.62□□□□□ -0.87
RTN3-209ENST00000538995 OAZ3Q9UMX2 235 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms