RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TIPRLO75663 272 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 IFNGP01579 166 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 ZNF3P17036 446 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 IER3P46695 156 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 MXRA7P84157 204 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 MICBQ29980 383 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 MICAQ29983 383 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 KLHL12Q53G59 568 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 BRICD5Q6PL45 260 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 FAM57BQ71RH2 274 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 DPY19L4Q7Z388 723 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 VMO1Q7Z5L0 202 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 PDZD9Q8IXQ8 264 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 PIP4P2Q8N4L2 257 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 FAM216BQ8N7L0 139 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 SCCPDHQ8NBX0 429 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 LY6G5BQ8NDX9 201 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 OR6N2Q8NGY6 317 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 INTS14Q96SY0 518 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 AMELYQ99218 206 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 CCL13Q99616 98 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 ABHD6Q9BV23 337 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 TLNRD1Q9H1K6 362 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 MAGIXQ9H6Y5 334 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 PPP1R3EQ9H7J1 279 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 CNTD2Q9H8S5 307 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 SP140LQ9H930 580 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 CMC2Q9NRP2 79 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 ZNF319Q9P2F9 582 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 U3KQV3 271 aa10.31□□□□□ -0.76
VAMP1-206ENST00000538970 DOCK11Q5JSL3 2073 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 A0A1B0GVI7 797 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 FAM183AA6NL82 134 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 APOC1P02654 83 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 CFL1P23528 166 aaKnown RBP10.3□□□□□ -0.76
VAMP1-206ENST00000538970 OPRL1P41146 370 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 GSK3AP49840 483 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 ZNF121P58317 390 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-206ENST00000538970 KRTAP10-3P60369 221 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 GFOD2Q3B7J2 385 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 OR2T5Q6IEZ7 315 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 LCN8Q6JVE9 175 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 RHOUQ7L0Q8 258 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 ERI1Q8IV48 349 aaKnown RBP10.3□□□□□ -0.76
VAMP1-206ENST00000538970 OR52H1Q8NGJ2 320 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 OR2T29Q8NH02 315 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 C12orf43Q96C57 262 aaKnown RBP10.3□□□□□ -0.76
VAMP1-206ENST00000538970 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 SEH1LQ96EE3 360 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 NIPSNAP1Q9BPW8 284 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 PAPOLGQ9BWT3 736 aaKnown RBP10.3□□□□□ -0.76
VAMP1-206ENST00000538970 REEP1Q9H902 201 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 MED20Q9H944 212 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 DNAJC27Q9NZQ0 273 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 ARL2BPQ9Y2Y0 163 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 RHBDD3Q9Y3P4 386 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 SAMHD1Q9Y3Z3 626 aaKnown RBP10.3□□□□□ -0.76
VAMP1-206ENST00000538970 RYR3Q15413 4870 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 NOTCH1P46531 2555 aa10.3□□□□□ -0.76
VAMP1-206ENST00000538970 M0QZ24 198 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 ACOT8O14734 319 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 CDIPTO14735 213 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 DCTN3O75935 186 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 GLCEO94923 617 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 AMY2BP19961 511 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 GSTT1P30711 240 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 GNALP38405 381 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 NAA10P41227 235 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-206ENST00000538970 STUMQ69YW2 141 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 METAP1DQ6UB28 335 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-206ENST00000538970 CD300LDQ6UXZ3 194 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 SLC36A1Q7Z2H8 476 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 PIGWQ7Z7B1 504 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 TIGD4Q8IY51 512 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 GALNT4Q8N4A0 578 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 IQCF1Q8N6M8 205 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 CSNK2A3Q8NEV1 391 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 OR10G2Q8NGC3 310 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 TEX47Q8TBZ9 253 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 DMRTB1Q96MA1 342 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 CCT8L2Q96SF2 557 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 DCTN5Q9BTE1 182 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 OR10A2Q9H208 303 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 SEMA6AQ9H2E6 1030 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 MUC13Q9H3R2 512 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 RGCCQ9H4X1 137 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 ONECUT1Q9UBC0 465 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 PRPF19Q9UMS4 504 aaKnown RBP10.29□□□□□ -0.76
VAMP1-206ENST00000538970 RNF114Q9Y508 228 aa10.29□□□□□ -0.76
VAMP1-206ENST00000538970 ANXA2P2A6NMY6 339 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 GPR37O15354 613 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 NDUFB3O43676 98 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 CLPXO76031 633 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 H2BFMP0C1H6 154 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 SELLP14151 372 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 TGM4P49221 684 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 MNAT1P51948 309 aa10.28□□□□□ -0.76
VAMP1-206ENST00000538970 PROK1P58294 105 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms