RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 HRH1P35367 487 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 CASRP41180 1078 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 S100A12P80511 92 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
CDCA3-207ENST00000538862 KCNMB1Q16558 191 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF239Q16600 458 aaKnown RBP12.84□□□□□ -0.35
CDCA3-207ENST00000538862 PXDC1Q5TGL8 231 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 OR52W1Q6IF63 320 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 ZNF600Q6ZNG1 722 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 OR6X1Q8NH79 312 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 OR51E1Q8TCB6 317 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 ELP5Q8TE02 316 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 PPP1R1CQ8WVI7 109 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 SEC61A2Q9H9S3 476 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 COQ3Q9NZJ6 369 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 MYOTQ9UBF9 498 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 DKK4Q9UBT3 224 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 POLR1DQ9Y2S0 133 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 KCNK7Q9Y2U2 307 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 EFSO43281 561 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 NDUFA2O43678 99 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 TRAF3IP2O43734 574 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-207ENST00000538862 SSX5O60225 188 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 DUS4LO95620 317 aaKnown RBP12.84□□□□□ -0.35
CDCA3-207ENST00000538862 GNB3P16520 340 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 FKBP2P26885 142 aaKnown RBP12.84□□□□□ -0.35
CDCA3-207ENST00000538862 HAAOP46952 286 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 TAS2R31P59538 309 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 MOB3CQ70IA8 216 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 KCNG3Q8TAE7 436 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 ST8SIA4Q92187 359 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 OR6C1Q96RD1 312 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 VRK1Q99986 396 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-207ENST00000538862 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 TMEM185BQ9H7F4 350 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 METTL7AQ9H8H3 244 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 ANAPC10Q9UM13 185 aa12.84□□□□□ -0.35
CDCA3-207ENST00000538862 CCDC187A0A096LP49 1063 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 LOC102725191A0A1B0GVB3 256 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 OR2AT4A6NND4 320 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 TRIM77I1YAP6 450 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 LGALS8O00214 317 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 SCRG1O75711 98 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 TIAF1O95411 115 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 CCL1P22362 96 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 SLC22A6Q4U2R8 563 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 ACTBL2Q562R1 376 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 FAM69BQ5VUD6 431 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 TFAP2EQ6VUC0 442 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 HOGA1Q86XE5 327 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF101Q8IZC7 436 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 OR5AS1Q8N127 324 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 THAP6Q8TBB0 222 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 SLC22A8Q8TCC7 542 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 SLC25A43Q8WUT9 341 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-207ENST00000538862 SEC22AQ96IW7 307 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 GPR160Q9UJ42 338 aa12.83□□□□□ -0.36
CDCA3-207ENST00000538862 MRPS28Q9Y2Q9 187 aaKnown RBP12.83□□□□□ -0.36
CDCA3-207ENST00000538862 RNF222A6NCQ9 220 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 CCSO14618 274 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 LIPCP11150 499 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ADH6P28332 368 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 DLSTP36957 453 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 STARP49675 285 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 PRKXP51817 358 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ATP1B3P54709 279 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ZFP36L1Q07352 338 aaKnown RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 EIF3IQ13347 325 aaKnown RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 PNLIPRP3Q17RR3 467 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 GLIPR1L1Q6UWM5 242 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 RAB11FIP2Q7L804 512 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 NAA40Q86UY6 237 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ARL6IP6Q8N6S5 226 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 OR2M3Q8NG83 312 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 OR10G3Q8NGC4 313 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 OR8B12Q8NGG6 310 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 OR10K1Q8NGX5 313 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 OR4K15Q8NH41 348 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 FBXW5Q969U6 566 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 LIN37Q96GY3 246 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 CCDC74BQ96LY2 380 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 C1orf147Q96MC9 270 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 OR5B2Q96R09 309 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 LDAHQ9H6V9 325 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ASCL3Q9NQ33 180 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 C19orf25Q9UFG5 118 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 RARRES3Q9UL19 164 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 HDGFL3Q9Y3E1 203 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 LOC100509620A0A075B734 347 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 IGHV5-10-1A0A0J9YXX1 117 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 DBX1A6NMT0 343 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 TNFSF15O95150 251 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ABOP16442 354 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 EIF1P41567 113 aaKnown RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF121P58317 390 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 MFAP5Q13361 173 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms