RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 BBS1Q8NFJ9 593 aa17.91■□□□□ 0.46
CCDC78-215ENST00000538176 DVL3Q92997 716 aaPredicted RBP17.91■□□□□ 0.46
CCDC78-215ENST00000538176 PAPOLGQ9BWT3 736 aaKnown RBP17.91■□□□□ 0.46
CCDC78-215ENST00000538176 GABARAPL1Q9H0R8 117 aa17.91■□□□□ 0.46
CCDC78-215ENST00000538176 ZNF319Q9P2F9 582 aa17.91■□□□□ 0.46
CCDC78-215ENST00000538176 hCG_1807616A0A1W2PRN6 198 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 CST4P01036 141 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 BPIFB3P59826 476 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 ROM1Q03395 351 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 GFOD2Q3B7J2 385 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 SLX4IPQ5VYV7 408 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 TEX36Q5VZQ5 186 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 ZNF841Q6ZN19 808 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 MEPCEQ7L2J0 689 aaKnown RBP17.9■□□□□ 0.46
CCDC78-215ENST00000538176 ZNF679Q8IYX0 411 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 GCSAMQ8N6F7 178 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 OR1M1Q8NGA1 313 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 DACT3Q96B18 629 aaPredicted RBP17.9■□□□□ 0.46
CCDC78-215ENST00000538176 UPRTQ96BW1 309 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 NUDT16L1Q9BRJ7 211 aaKnown RBP17.9■□□□□ 0.46
CCDC78-215ENST00000538176 RTL8AQ9BWD3 113 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 KAAG1Q9UBP8 84 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 LRP12Q9Y561 859 aa17.9■□□□□ 0.46
CCDC78-215ENST00000538176 A0A0U1RQV5 110 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 TMEM269A0A1B0GVZ9 245 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 TMEM210A6NLX4 147 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 ZAR1LA6NP61 321 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 TNFRSF13BO14836 293 aaPredicted RBP17.89■□□□□ 0.45
CCDC78-215ENST00000538176 ENSAO43768 121 aaKnown RBP17.89■□□□□ 0.45
CCDC78-215ENST00000538176 MAP2K3P46734 347 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 EFNB1P98172 346 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 MICBQ29980 383 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 SFRP4Q6FHJ7 346 aaPredicted RBP17.89■□□□□ 0.45
CCDC78-215ENST00000538176 LYPD2Q6UXB3 125 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 KRT74Q7RTS7 529 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 C12orf43Q96C57 262 aaKnown RBP17.89■□□□□ 0.45
CCDC78-215ENST00000538176 CENPNQ96H22 339 aaPredicted RBP17.89■□□□□ 0.45
CCDC78-215ENST00000538176 HIST1H2AAQ96QV6 131 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 CNN2Q99439 309 aaKnown RBP17.89■□□□□ 0.45
CCDC78-215ENST00000538176 SLC6A7Q99884 636 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 ZMAT3Q9HA38 289 aaKnown RBP17.89■□□□□ 0.45
CCDC78-215ENST00000538176 HAO2Q9NYQ3 351 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 RHBDD3Q9Y3P4 386 aa17.89■□□□□ 0.45
CCDC78-215ENST00000538176 C3orf80F5H4A9 247 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 PRKYO43930 277 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 ECDO95905 644 aaPredicted RBP17.88■□□□□ 0.45
CCDC78-215ENST00000538176 MTNR1AP48039 350 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 TUSC1Q2TAM9 212 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 ZNF829Q3KNS6 432 aaPredicted RBP17.88■□□□□ 0.45
CCDC78-215ENST00000538176 FAM76BQ5HYJ3 339 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 GID4Q8IVV7 300 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 C10orf67Q8IYJ2 551 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 BOLLQ8N9W6 283 aaKnown RBP17.88■□□□□ 0.45
CCDC78-215ENST00000538176 TMEM163Q8TC26 289 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 ITPKCQ96DU7 683 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 DMRTB1Q96MA1 342 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 OR8B4Q96RC9 309 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 MS4A7Q9GZW8 240 aaPredicted RBP17.88■□□□□ 0.45
CCDC78-215ENST00000538176 TLNRD1Q9H1K6 362 aa17.88■□□□□ 0.45
CCDC78-215ENST00000538176 CCDC182A6NF36 153 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 GPR37O15354 613 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 ADAM20O43506 726 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 RIDAP52758 137 aaKnown RBP17.87■□□□□ 0.45
CCDC78-215ENST00000538176 C12orf73Q69YU5 71 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 C12orf54Q6X4T0 127 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 ZNF826PQ6ZT77 177 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 C9orf139Q6ZV77 190 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 DOK3Q7L591 496 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 C11orf53Q8IXP5 236 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.87■□□□□ 0.45
CCDC78-215ENST00000538176 TCEANCQ8N8B7 351 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 PNLDC1Q8NA58 520 aaKnown RBP17.87■□□□□ 0.45
CCDC78-215ENST00000538176 OR8B12Q8NGG6 310 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 OR10Z1Q8NGY1 313 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 TECTBQ96PL2 329 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 KLHDC2Q9Y2U9 406 aa17.87■□□□□ 0.45
CCDC78-215ENST00000538176 MTRF1O75570 445 aaKnown RBP17.86■□□□□ 0.45
CCDC78-215ENST00000538176 HCCSP53701 268 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 PRDX4Q13162 271 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 KLF17Q5JT82 389 aaPredicted RBP17.86■□□□□ 0.45
CCDC78-215ENST00000538176 ZBTB37Q5TC79 503 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 AADACL4Q5VUY2 407 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 WDR82Q6UXN9 313 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 SLC36A1Q7Z2H8 476 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 AMIGO2Q86SJ2 522 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 C19orf18Q8NEA5 215 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 FAM81AQ8TBF8 368 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 LRRC29Q8WV35 223 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 LRTOMTQ8WZ04 291 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 OR5P3Q8WZ94 311 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 PIGCQ92535 297 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 FAM206AQ9NX38 181 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 ZNF69Q9UC07 566 aa17.86■□□□□ 0.45
CCDC78-215ENST00000538176 ZNF816-ZNF321PA0A0X1KG74 233 aa17.85■□□□□ 0.45
CCDC78-215ENST00000538176 ZNF850A8MQ14 1090 aa17.85■□□□□ 0.45
CCDC78-215ENST00000538176 MITFO75030 526 aaPredicted RBP17.85■□□□□ 0.45
CCDC78-215ENST00000538176 RGS9O75916 674 aaPredicted RBP17.85■□□□□ 0.45
CCDC78-215ENST00000538176 MRPL3P09001 348 aaKnown RBP17.85■□□□□ 0.45
CCDC78-215ENST00000538176 COMPP49747 757 aaPredicted RBP17.85■□□□□ 0.45
CCDC78-215ENST00000538176 ACTG1P63261 375 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms