RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 CDIPTO14735 213 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 MUC1P15941 1255 aaPredicted RBP6.96□□□□□ -1.3
USP28-203ENST00000537490 HSD11B1P28845 292 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 GSTT1P30711 240 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 GRK5P34947 590 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 IER3P46695 156 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 TGM4P49221 684 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 GSK3AP49840 483 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 GYS2P54840 703 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 DLX1P56177 255 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 ZNF121P58317 390 aaPredicted RBP6.96□□□□□ -1.3
USP28-203ENST00000537490 MXRA7P84157 204 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 MS4A2Q01362 244 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 OCLNQ16625 522 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 TIGD6Q17RP2 521 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 MICBQ29980 383 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 C11orf91Q3C1V1 193 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 SPATS1Q496A3 300 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 CDONQ4KMG0 1287 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 MIDNQ504T8 468 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 OR2T5Q6IEZ7 315 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 BRICD5Q6PL45 260 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 VMO1Q7Z5L0 202 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 PIGWQ7Z7B1 504 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 LDLRAD3Q86YD5 345 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 ERI1Q8IV48 349 aaKnown RBP6.96□□□□□ -1.3
USP28-203ENST00000537490 IQCF1Q8N6M8 205 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 FAM216BQ8N7L0 139 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 SCCPDHQ8NBX0 429 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 OR2T33Q8NG76 320 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 OR5T2Q8NGG2 359 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 OR6N2Q8NGY6 317 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 OR2T29Q8NH02 315 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 LINC01006Q8NI28 216 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 RNF133Q8WVZ7 376 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 DYRK2Q92630 601 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 NIPSNAP1Q9BPW8 284 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 FGF23Q9GZV9 251 aaPredicted RBP6.96□□□□□ -1.3
USP28-203ENST00000537490 TLNRD1Q9H1K6 362 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 SEMA6AQ9H2E6 1030 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 TOR3AQ9H497 397 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 BRD7Q9NPI1 651 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 CMC2Q9NRP2 79 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 DNAJC27Q9NZQ0 273 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 DNAJB11Q9UBS4 358 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 ARL2BPQ9Y2Y0 163 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 SAMHD1Q9Y3Z3 626 aaKnown RBP6.96□□□□□ -1.3
USP28-203ENST00000537490 RNF114Q9Y508 228 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 KPTNQ9Y664 436 aa6.96□□□□□ -1.3
USP28-203ENST00000537490 MEGF8Q7Z7M0 2845 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 A0A1B0GVI7 797 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 A0A1W2PRD5 423 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 A0A1W2PRF3 423 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 A0A1W2PRM7 423 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 RIIAD1A6NNX1 92 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 B2RBV5 119 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 RNASEK-C17orf49H0YIS7 233 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 NDUFB3O43676 98 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 GLCEO94923 617 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 IFNGP01579 166 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 TFF1P04155 84 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 SELLP14151 372 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 ZNF3P17036 446 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 OPRL1P41146 370 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 NAA10P41227 235 aaPredicted RBP6.95□□□□□ -1.3
USP28-203ENST00000537490 BLVRAP53004 296 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 PROK1P58294 105 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 GMFBP60983 142 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 RPL15P61313 204 aaKnown RBP6.95□□□□□ -1.3
USP28-203ENST00000537490 IKZF1Q13422 519 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 TAF9Q16594 264 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 GFOD2Q3B7J2 385 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 ATPAF1Q5TC12 328 aaPredicted RBP6.95□□□□□ -1.3
USP28-203ENST00000537490 ASPHD2Q6ICH7 369 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 LCN8Q6JVE9 175 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 Q6ZSV7 163 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 SLC36A1Q7Z2H8 476 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 TIGD4Q8IY51 512 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 GALNT4Q8N4A0 578 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 Q8N7P7 452 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 OR10G2Q8NGC3 310 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 RPL3LQ92901 407 aaKnown RBP6.95□□□□□ -1.3
USP28-203ENST00000537490 OTULINQ96BN8 352 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 ITPKCQ96DU7 683 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 PGAM5Q96HS1 289 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 LYZL4Q96KX0 146 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 CCT8L2Q96SF2 557 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 INTS14Q96SY0 518 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 MICU1Q9BPX6 476 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 DCTN5Q9BTE1 182 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 PAPOLGQ9BWT3 736 aaKnown RBP6.95□□□□□ -1.3
USP28-203ENST00000537490 WDR13Q9H1Z4 485 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 OR10A2Q9H208 303 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 OR51V1Q9H2C8 321 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 MAGIXQ9H6Y5 334 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 REEP1Q9H902 201 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 SP140LQ9H930 580 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 SIRT7Q9NRC8 400 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 SNTG1Q9NSN8 517 aa6.95□□□□□ -1.3
USP28-203ENST00000537490 NDE1Q9NXR1 346 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms